PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145721.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 706aa MW: 79278.9 Da PI: 5.2313

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.8	0.00022	530	567	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr+++P+ a K s Lek+++++ +Lq XP_022145721.1 530 RQLIQDRIKELRQIVPNgA------KCSIDGLLEKTIKHMLYLQ 567 67799**********66......999999*********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
METAALHQLL KSFCNNSHWI YAVFWKIKYQ SPPILAWEDG YCNYQKSEKH MGSMTEYRLI 60 GERDEHVSSY YGTNIHNDDS GSCSVGPAVA DMSCLQYVLG EGTVGSVASS GNHSWIFLEN 120 IFASDVFSDS IYEGPTEWLI QYASGIKTIL LVPVLPFGVL QLGSLQTVSE NLSAVAYIKD 180 KFSPIHFVDG NAAIVASDKG VWPPLCASVF SHSLSEILNE QTNITTNLLE IETHGATEDV 240 KPPLSTSISF SATQDVLTVS RRIRPETFHS GKEHKCDMQA ANLEEPFALL YQSIRASEVE 300 FSDLFSPESL LPASTQLRNH DGLFEGNPHS VHSYSADNVF GHNLVTKKEY GTADNFFSFR 360 DDCELHEALG PAFFAQKQTN EFSYDSSGSI KDTTSSLMCS RDFNEGDIEH LLEAMLTAFD 420 NSDDTFSNST INARMTPTVG KSGLFAENCS QSESRAMVVD DPAPWIFPES TVTEIDRKHY 480 TSLSTSNSLV INKREKNDCD IAQQRKGMKS SNSSRRTKVA SSPRQRPRDR QLIQDRIKEL 540 RQIVPNGAKC SIDGLLEKTI KHMLYLQRVT DQADKLKQLA AQQEDSDSEN HTALDNEDFR 600 QNGASWTWAF EIGSDPQVCP IVVEDLEYQG HMLIKMLCND MGLFLEIAQI IRNLEITILK 660 GVIERHSNNS WAHFIVEAPR GFHRMDIFWP LMHLLQRKRN PISSRI

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

METAALHQLL KSFCNNSHWI YAVFWKIKYQ SPPILAWEDG YCNYQKSEKH MGSMTEYRLI  60
GERDEHVSSY YGTNIHNDDS GSCSVGPAVA DMSCLQYVLG EGTVGSVASS GNHSWIFLEN  120
IFASDVFSDS IYEGPTEWLI QYASGIKTIL LVPVLPFGVL QLGSLQTVSE NLSAVAYIKD  180
KFSPIHFVDG NAAIVASDKG VWPPLCASVF SHSLSEILNE QTNITTNLLE IETHGATEDV  240
KPPLSTSISF SATQDVLTVS RRIRPETFHS GKEHKCDMQA ANLEEPFALL YQSIRASEVE  300
FSDLFSPESL LPASTQLRNH DGLFEGNPHS VHSYSADNVF GHNLVTKKEY GTADNFFSFR  360
DDCELHEALG PAFFAQKQTN EFSYDSSGSI KDTTSSLMCS RDFNEGDIEH LLEAMLTAFD  420
NSDDTFSNST INARMTPTVG KSGLFAENCS QSESRAMVVD DPAPWIFPES TVTEIDRKHY  480
TSLSTSNSLV INKREKNDCD IAQQRKGMKS SNSSRRTKVA SSPRQRPRDR QLIQDRIKEL  540
RQIVPNGAKC SIDGLLEKTI KHMLYLQRVT DQADKLKQLA AQQEDSDSEN HTALDNEDFR  600
QNGASWTWAF EIGSDPQVCP IVVEDLEYQG HMLIKMLCND MGLFLEIAQI IRNLEITILK  660
GVIERHSNNS WAHFIVEAPR GFHRMDIFWP LMHLLQRKRN PISSRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-45	bHLH family protein