PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145654.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 242aa    MW: 27255.8 Da    PI: 6.3142
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000165476123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_022145654.1 54 YSCSFCRREFRSAQALGGHMNVH 76
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MWTKQRHDFD FDDSSATKTK SSFEYNESWE EQAFAEDAAA AGRLGGCVWP PRSYSCSFCR  60
REFRSAQALG GHMNVHRRDR ARLKQSPNPQ NFPNFTPTLP FQFSPSHHQL ISTSSSTTHP  120
SCSGFCSDEL DPRPTRSDSR ISCPRVMDKD HVIEAAGFSN EGQLNFGLRQ PRPEEEEDDD  180
DNGGRDETGA ATGCKKRKTD DEKSIQFYHL HHHHIQSEVI GISSSQLHDV DLELRLGGLS  240
KG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.11e-22C2H2 family protein