PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145470.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 300aa MW: 34545.6 Da PI: 5.1318

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.6e-05	42	65	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C+ Cg+ ++++ +Lk+H + H XP_022145470.1 42 YVCGVCGRKCKTNLDLKKHFKQlH 65 9******************98767 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MSAYANRHAF IHLPQWVVEE RRERRQLDIL ERKGLISPSE SYVCGVCGRK CKTNLDLKKH 60 FKQLHERERQ KKLNRMRSLK GKKRQRYKER FISGNEKYNE AARSLITPKV GYGLASELRR 120 AGVFVKTVED KPQAADWALK RQMQHSMSRG IDWMFLVSDD SDFSEMLRKA KDANLGTVVV 180 GDRDRALGRH ADLWVPWISV ESGNVTEEDL VPKRWRTSRS EEGLDEDDGF SVSRFYGDIE 240 AGSDLESVVE ELASSSTGFN GFRISAFSEG EDEAEEDEWA EEDVAPDYLL EMSDEEDGYF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	62	RRERRQLDILERKGLISPSESYVCGVCGRKCKTNLDLKKHFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-127	C2H2 family protein