PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145318.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HSF

Protein Properties

Length: 514aa MW: 56242.7 Da PI: 4.7767

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.5	1.4e-35	36	127	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++ + ++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_022145318.1 36 FLSKTYDMVDDPASDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKS 121 9******************999*************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_022145318.1 122 ITRRKP 127 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MDGNGSGGEA GLSSGSGSSP PTVPAPITNA NAPPPFLSKT YDMVDDPASD AVVSWSPTNN 60 SFVVWNPPEF ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK 120 SITRRKPVHG HSQQQPQQSH GQSSSVGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ 180 QQQTTDNQLQ TMVQRLQGME QRQQQMMSFL AKAVQSPGFL AQFVQQQNES TRRISEANKK 240 RRLKQDGIAE SQHSAVADGQ IVKYQPLMND AAKAMLRQIM KIDTSRLEPS DQNTDSFLMS 300 DGLPSSCALD NGNSSSSVSG VTLQEVPPTS GQPSFTSAAA PHGPSTARSE IQSSPQATTS 360 DKVSTVPFSV NAVRGPGARE ASSLSVSETD VIMPELSPMT EMVSENVVDV PGADYRMPET 420 GNGAFINPSM LEASGTIPIE IDNISPDPDI DALLDNSNFW DDLLVQSPGQ EEVDFLAGGF 480 PNDMQPVENL WDKSKHVDKL TEQMGLLTSE MKRV

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MDGNGSGGEA GLSSGSGSSP PTVPAPITNA NAPPPFLSKT YDMVDDPASD AVVSWSPTNN  60
SFVVWNPPEF ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK  120
SITRRKPVHG HSQQQPQQSH GQSSSVGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ  180
QQQTTDNQLQ TMVQRLQGME QRQQQMMSFL AKAVQSPGFL AQFVQQQNES TRRISEANKK  240
RRLKQDGIAE SQHSAVADGQ IVKYQPLMND AAKAMLRQIM KIDTSRLEPS DQNTDSFLMS  300
DGLPSSCALD NGNSSSSVSG VTLQEVPPTS GQPSFTSAAA PHGPSTARSE IQSSPQATTS  360
DKVSTVPFSV NAVRGPGARE ASSLSVSETD VIMPELSPMT EMVSENVVDV PGADYRMPET  420
GNGAFINPSM LEASGTIPIE IDNISPDPDI DALLDNSNFW DDLLVQSPGQ EEVDFLAGGF  480
PNDMQPVENL WDKSKHVDKL TEQMGLLTSE MKRV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	245	NKKRRLKQ
2	239	244	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-126	HSF family protein