PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145282.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family WOX
Protein Properties Length: 278aa    MW: 31518.2 Da    PI: 6.3495
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.96.4e-2298158257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+t+t+ ql++Le+ Fe+ n +ps+++++e++++l    +++e++V++WFqNrRa+ k+
  XP_022145282.1  98 RQRWTPTPVQLQILERIFEQgNGTPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 158
                     89*****************99**************************************97 PP
2Wus_type_Homeobox1001.8e-3297160265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        +r+RWtPtp Q++iLe+++++G  tP+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq
     XP_022145282.1  97 SRQRWTPTPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 160
                        789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MMEWEKAEQQ NPYHHQNPPL HLTGTTTAAA AGALYVKVMT DDQLETLRKQ IAVYATICEQ  60
LVEMHKTLTA HHDLTGMRLG NMYCEPLMTS SGHKITSRQR WTPTPVQLQI LERIFEQGNG  120
TPSKQKIKEI TSELGQHGQI SESNVYNWFQ NRRARSKRKQ QNTAPAYAES EVETDVESPK  180
DKKTRPVDFQ SLQTSAPLGE DMCFQSPDQM SSELHFLDPN TNKADATFPS NGSLKPARSF  240
SQMSFYEAGN EQLTGKIETP ENYSLYQHAE GYSMSERP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152160RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.12e-89WOX family protein