PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145251.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 803aa MW: 88937 Da PI: 4.7098

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.9	0.00021	589	626	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_022145251.1 589 RQQIQDRIKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 626 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence
MGETEVGSVL SRICRSNRWS YAVFWSFDQR NSMLLTLEDI WYEEQVGLIA ANMLHQVHIL 60 GEGVIGTAAF TGKHRWIFSD ASIGEWNSSI FQDNLEFQQQ FSCGIKTVAV IPVHPHGVMQ 120 LGSIHKILES LEFLADAKRS LSQVINGDEL VAMKTTPMVS SADICHSHFN ELLTSIVSSA 180 NADDWSLSAM HNNNHTDFTG KSYASIEKQQ AFDSSYFSKS SCETSVLTSS EPLPRSDVRE 240 QDAQHPSYLD GHILESCIDD MDYGNQSSTF ASVSSRTGFP HTDNVQQSVQ LLPLTEGELM 300 ESVTCLPDFH DKHISEDFTM DLPDISLVED LFQWFDSSPE IRPNGAATTT LNDNLPQSVG 360 VPTLSSNLVE VNKSTDDLTG VSAQSLITHG SQSSGQDKTV RIQNAKDRLF DSLGLDTGFP 420 VAKSWDNLIT EAHGSYSGGC NSMSTCTSKL ADGSSDLPRK RLFWELGIEE LLDGLNNTSS 480 ATKSSVENHQ SSASKRSKME RWSLDSNPIQ LADPCINMNL TQPLCTVDRF PCKKDAVPKS 540 QVSSWIDDSY STNIGGSLLE LSQKSEEPAK TSKKRARPGE SNRPRPKDRQ QIQDRIKELR 600 GIIPSGAKCS IDSLLDRTIK YMLFLQSVTK YADKLKETNK PKLIDQENGV ALNDKCTMER 660 GSGGVTWAFK VGATPMVCPV IVEDLSSPGQ MLVEMLCEER GFFLEIADMI RSYGLTILKG 720 VMEIREDKIW AQFVVEVKLN TNQSITRINV FLSLMELLQQ ANIGETELPN HQSNNAMDSD 780 VPLMDCFQNP TLQIPITLAE ALQ

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence

MGETEVGSVL SRICRSNRWS YAVFWSFDQR NSMLLTLEDI WYEEQVGLIA ANMLHQVHIL  60
GEGVIGTAAF TGKHRWIFSD ASIGEWNSSI FQDNLEFQQQ FSCGIKTVAV IPVHPHGVMQ  120
LGSIHKILES LEFLADAKRS LSQVINGDEL VAMKTTPMVS SADICHSHFN ELLTSIVSSA  180
NADDWSLSAM HNNNHTDFTG KSYASIEKQQ AFDSSYFSKS SCETSVLTSS EPLPRSDVRE  240
QDAQHPSYLD GHILESCIDD MDYGNQSSTF ASVSSRTGFP HTDNVQQSVQ LLPLTEGELM  300
ESVTCLPDFH DKHISEDFTM DLPDISLVED LFQWFDSSPE IRPNGAATTT LNDNLPQSVG  360
VPTLSSNLVE VNKSTDDLTG VSAQSLITHG SQSSGQDKTV RIQNAKDRLF DSLGLDTGFP  420
VAKSWDNLIT EAHGSYSGGC NSMSTCTSKL ADGSSDLPRK RLFWELGIEE LLDGLNNTSS  480
ATKSSVENHQ SSASKRSKME RWSLDSNPIQ LADPCINMNL TQPLCTVDRF PCKKDAVPKS  540
QVSSWIDDSY STNIGGSLLE LSQKSEEPAK TSKKRARPGE SNRPRPKDRQ QIQDRIKELR  600
GIIPSGAKCS IDSLLDRTIK YMLFLQSVTK YADKLKETNK PKLIDQENGV ALNDKCTMER  660
GSGGVTWAFK VGATPMVCPV IVEDLSSPGQ MLVEMLCEER GFFLEIADMI RSYGLTILKG  720
VMEIREDKIW AQFVVEVKLN TNQSITRINV FLSLMELLQQ ANIGETELPN HQSNNAMDSD  780
VPLMDCFQNP TLQIPITLAE ALQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	3e-51	bHLH family protein