PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145183.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 393aa    MW: 44575.7 Da    PI: 5.1726
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145183.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS321.61.6e-98143923374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshl 96 
                     +lL ecA+a+s++d ++++++L+ l+elasp+gd+ q+la+yf++AL  r +++++++yk+l + ++++++ +++     l f+e+sP+ +f+h+
  XP_022145183.1  14 TLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGQSCYKTLVAVAEKNHSFDSARRLI-LkFQEASPWTTFGHV 107
                     6899**********************************************************99988744433333344.26************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledle 190
                     + N aIlea+ege+++HiiD++ + ++QWp+Ll++La+R++++p+l++T+v   ++  k  ++e+g+r++kfA+ +gvpfefn++   ++l++l+
  XP_022145183.1 108 ASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVIT-TTIVKPVMKEIGQRMEKFARLMGVPFEFNPItNLNHLTELT 201
                     ****************************************************9.6679**************************955569***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseeri 283
                      e+L+v+++Ea+a+n++ +l r+      +e+ r++v+ ++ksl+P+v+++ve+ead   ++++F + f e+l++y+  f++le+++ ++s+er 
  XP_022145183.1 202 KEALKVEEDEAIAINCIGALRRVR-----IEE-RNNVITMFKSLNPRVLTIVEEEADFisSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERL 290
                     **********************97.....555.889*********************9867789******************************* PP

            GRAS 284 kvErellgreivnvvacegae...rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..........eesgslvlgWkdr 365
                     ++Ere  +r+iv ++ c ++e     er+e+ ++W++rl+ea F+++ +s+++++++k+ll+++   g+ v           e++  ++l+Wk++
  XP_022145183.1 291 VLERE-CSRSIVRLLGCDESEgemGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYR-SGWAVSdrpaeeeedaESRVGAYLTWKEE 383
                     *****.89********97766433789*************************************9.88999856665543333367788****** PP

            GRAS 366 pLvsvSaWr 374
                     ++v+vSaW+
  XP_022145183.1 384 SVVWVSAWK 392
                     ********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
SPSAAGAAGK WASTLLKECA KAISEKDSNK IHHFLWMLNE LASPYGDSDQ KLASYFLQAL  60
FCRATETGQS CYKTLVAVAE KNHSFDSARR LILKFQEASP WTTFGHVASN GAILEALEGE  120
TKLHIIDISN TLCTQWPTLL ESLATRNDDT PHLKLTVVIT TTIVKPVMKE IGQRMEKFAR  180
LMGVPFEFNP ITNLNHLTEL TKEALKVEED EAIAINCIGA LRRVRIEERN NVITMFKSLN  240
PRVLTIVEEE ADFISSKNDF QKCFEECLRF YTLYFEMLEE SFVATSNERL VLERECSRSI  300
VRLLGCDESE GEMGSERRER GRQWSKRLKE AAFSSAGFSD DVMDDVKALL KRYRSGWAVS  360
DRPAEEEEDA ESRVGAYLTW KEESVVWVSA WKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-138GRAS family protein