PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145180.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 576aa    MW: 65883.3 Da    PI: 4.7672
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS266.77.5e-822145742374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae v  ++  +a++lL+r + +asp g+++qRl++yf++AL++r+ r   e+ +a   +++  ++ + +l al+   +  P+ ++ +l
  XP_022145180.1 214 AHVLFAAAEKVGYQQYDRASRLLQRCEWTASPVGNAVQRLVFYFAKALRRRIER---ETGRAAMKEPK--EDWEMTLEALRGCMK-LPFQQVMQL 302
                     799***************************************************...33322222222..234444455554444.5******** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     ta qaI e v+  ++vH iD++i  G++W+a++q+L   ++ +   l+iT+v+s   ++ + +e++g+ L+++Ae+l++pf+f++++++++ +++
  XP_022145180.1 303 TAVQAIFEHVKPISKVHLIDLEIRSGVHWAAFMQSLVdLKELPIKLLKITAVVS---EKFHLIEKVGKWLENVAESLNIPFSFKPILVSDMMEIK 394
                     *************************************445567779********...4578899******************************* PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                      e ++v+++E++a+ + l+l ++ ++++ le+    +++++++l+P ++vv+e ea++n +sF++rf+e+l +  + fd+le+ + ++++ r+k+
  XP_022145180.1 395 EELFEVEEDEMVAIYSPLALRTMISRPTRLEN----LMRVIRNLKPSIMVVSEVEANYNLSSFVNRFIESLFFTGSYFDCLETCIVEDEDSRRKI 485
                     ************************99999999....*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E +  g+ i+nvva eg++r+er  + e Wr+ + ++ ++++++se+  +qakl+ + ++ ++  ++e++ ++l+ gWk+ p++svSaW+
  XP_022145180.1 486 EVF-CGEGIENVVALEGSDRVERGVKIEVWRAFFARFRMEEMEFSESCLSQAKLVAEGFAyGNSCSLEKNGKCLIVGWKETPILSVSAWQ 574
                     *99.8*******************************************************9999*************************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    
MADGFFSFTP FDFNGSQGEA FFPFNGCYEK PESELRGKAD DCPFRMEEFG DFNFLSADQS  60
GFYQQNVPKI GDQTNYQQPY SDDLIFDELL FNNNITISES IPEKSKISEN LAADSISFNP  120
SKQVSNPCLE SLQLLNSYGA KFKRRMKGTK LGNRGIEASE ENKKLSTEEI LRVAGARYVH  180
FFPEGHDDFY MPMHPCDFAL SGLSEDEIKD VELAHVLFAA AEKVGYQQYD RASRLLQRCE  240
WTASPVGNAV QRLVFYFAKA LRRRIERETG RAAMKEPKED WEMTLEALRG CMKLPFQQVM  300
QLTAVQAIFE HVKPISKVHL IDLEIRSGVH WAAFMQSLVD LKELPIKLLK ITAVVSEKFH  360
LIEKVGKWLE NVAESLNIPF SFKPILVSDM MEIKEELFEV EEDEMVAIYS PLALRTMISR  420
PTRLENLMRV IRNLKPSIMV VSEVEANYNL SSFVNRFIES LFFTGSYFDC LETCIVEDED  480
SRRKIEVFCG EGIENVVALE GSDRVERGVK IEVWRAFFAR FRMEEMEFSE SCLSQAKLVA  540
EGFAYGNSCS LEKNGKCLIV GWKETPILSV SAWQFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.14e-48GRAS family protein