PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022145180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | GRAS | ||||||||
Protein Properties | Length: 576aa MW: 65883.3 Da PI: 4.7672 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 266.7 | 7.5e-82 | 214 | 574 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 ++L+++Ae v ++ +a++lL+r + +asp g+++qRl++yf++AL++r+ r e+ +a +++ ++ + +l al+ + P+ ++ +l XP_022145180.1 214 AHVLFAAAEKVGYQQYDRASRLLQRCEWTASPVGNAVQRLVFYFAKALRRRIER---ETGRAAMKEPK--EDWEMTLEALRGCMK-LPFQQVMQL 302 799***************************************************...33322222222..234444455554444.5******** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 ta qaI e v+ ++vH iD++i G++W+a++q+L ++ + l+iT+v+s ++ + +e++g+ L+++Ae+l++pf+f++++++++ +++ XP_022145180.1 303 TAVQAIFEHVKPISKVHLIDLEIRSGVHWAAFMQSLVdLKELPIKLLKITAVVS---EKFHLIEKVGKWLENVAESLNIPFSFKPILVSDMMEIK 394 *************************************445567779********...4578899******************************* PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285 e ++v+++E++a+ + l+l ++ ++++ le+ +++++++l+P ++vv+e ea++n +sF++rf+e+l + + fd+le+ + ++++ r+k+ XP_022145180.1 395 EELFEVEEDEMVAIYSPLALRTMISRPTRLEN----LMRVIRNLKPSIMVVSEVEANYNLSSFVNRFIESLFFTGSYFDCLETCIVEDEDSRRKI 485 ************************99999999....*********************************************************** PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 E + g+ i+nvva eg++r+er + e Wr+ + ++ ++++++se+ +qakl+ + ++ ++ ++e++ ++l+ gWk+ p++svSaW+ XP_022145180.1 486 EVF-CGEGIENVVALEGSDRVERGVKIEVWRAFFARFRMEEMEFSESCLSQAKLVAEGFAyGNSCSLEKNGKCLIVGWKETPILSVSAWQ 574 *99.8*******************************************************9999*************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 576 aa Download sequence |
MADGFFSFTP FDFNGSQGEA FFPFNGCYEK PESELRGKAD DCPFRMEEFG DFNFLSADQS 60 GFYQQNVPKI GDQTNYQQPY SDDLIFDELL FNNNITISES IPEKSKISEN LAADSISFNP 120 SKQVSNPCLE SLQLLNSYGA KFKRRMKGTK LGNRGIEASE ENKKLSTEEI LRVAGARYVH 180 FFPEGHDDFY MPMHPCDFAL SGLSEDEIKD VELAHVLFAA AEKVGYQQYD RASRLLQRCE 240 WTASPVGNAV QRLVFYFAKA LRRRIERETG RAAMKEPKED WEMTLEALRG CMKLPFQQVM 300 QLTAVQAIFE HVKPISKVHL IDLEIRSGVH WAAFMQSLVD LKELPIKLLK ITAVVSEKFH 360 LIEKVGKWLE NVAESLNIPF SFKPILVSDM MEIKEELFEV EEDEMVAIYS PLALRTMISR 420 PTRLENLMRV IRNLKPSIMV VSEVEANYNL SSFVNRFIES LFFTGSYFDC LETCIVEDED 480 SRRKIEVFCG EGIENVVALE GSDRVERGVK IEVWRAFFAR FRMEEMEFSE SCLSQAKLVA 540 EGFAYGNSCS LEKNGKCLIV GWKETPILSV SAWQFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03450.1 | 4e-48 | GRAS family protein |