PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145118.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 403aa MW: 45469.6 Da PI: 8.2259

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.5	8.8e-12	159	210	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ +++l+P++ + + + a+i A++++k+L+ XP_022145118.1 159 QRMTHIAVERNRRRQMNDHLNVIKSLIPTS---YIHRGDQASIIGGAIHFVKELE 210 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MERLQGHIHP CFYGEYSERG CSEQGFTSLR FEESEEAYFL TSTLEDKMPF LQMLQSVESQ 60 PFKEPNFQNL LKLQHLNKPW ELEEVSQIQE LVELYSSPIN SETKDQNQHP NSASYTDGVS 120 SECNQNQRTQ MAKAPPVTKE RRKRKRTRPA KNKEEVESQR MTHIAVERNR RRQMNDHLNV 180 IKSLIPTSYI HRGDQASIIG GAIHFVKELE QLLESLEAQR KGEEGGCKAK GELSSVGSRS 240 PTSSAMGMAS NGRIGEGVCA EHKSEVAEIE VTMIQTHVNL KIKCPKRQGQ LLKAIVALED 300 LRLTVLHLNI STSQATATMH YSFNLKIEDE CKIGSAEQIA ATVHQIFSFM NDGRLVKEGG 360 KGKFQAVQWQ SLTMENGRTP PLPFPKIKVR KLSKYGSGCG HLE

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MERLQGHIHP CFYGEYSERG CSEQGFTSLR FEESEEAYFL TSTLEDKMPF LQMLQSVESQ  60
PFKEPNFQNL LKLQHLNKPW ELEEVSQIQE LVELYSSPIN SETKDQNQHP NSASYTDGVS  120
SECNQNQRTQ MAKAPPVTKE RRKRKRTRPA KNKEEVESQR MTHIAVERNR RRQMNDHLNV  180
IKSLIPTSYI HRGDQASIIG GAIHFVKELE QLLESLEAQR KGEEGGCKAK GELSSVGSRS  240
PTSSAMGMAS NGRIGEGVCA EHKSEVAEIE VTMIQTHVNL KIKCPKRQGQ LLKAIVALED  300
LRLTVLHLNI STSQATATMH YSFNLKIEDE CKIGSAEQIA ATVHQIFSFM NDGRLVKEGG  360
KGKFQAVQWQ SLTMENGRTP PLPFPKIKVR KLSKYGSGCG HLE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	146	RRKRKR
2	160	171	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61950.1	2e-73	bHLH family protein