PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144734.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 565aa    MW: 62234.2 Da    PI: 4.6802
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.99e-351322232102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+++++ed++l++++sw ++g+sfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+k+++++         weF+++ F++gk++ll++
  XP_022144734.1 132 FLWKTFDLVEDPALDSIVSWGSTGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYGFRKIDTDR---------WEFANEAFQRGKRQLLKN 217
                     99***************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+ks
  XP_022144734.1 218 IQRRKS 223
                     ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    
MNPTEEGDSM SPLEKGKAPI GGSSSSSAQS ESDAAGFSSA CEFLSPFSRE LMGSEPFSPR  60
GSFLDDTAAG ISMVSIGLSA EIPMPSSSAP HLFDVKLEPD KGGDLDPFVV SCTGSDVPQP  120
LECLQGQLVP PFLWKTFDLV EDPALDSIVS WGSTGQSFVV WDPVEFSRVI LPSNFKHNNF  180
SSFVRQLNTY GFRKIDTDRW EFANEAFQRG KRQLLKNIQR RKSLHSQQIG SLIGPSTAGG  240
KSGLEDEVGR LKKERSMLMQ EVVELQQQQK GTARHVNMVN RRLQSAEQRQ KQMISFLSKL  300
LRNPSFLSRL QKKKEQKDID SPRMKRKFVK QHQYETDDIT PSMEGRIVKY QPDWENLAVS  360
SMALDLNPNL IEGPSANLLQ GISGELSSIX ESMSKFQFEN ASSSDVMASE ELAFHHGITK  420
TTEELRVEAS NMTMEDQHFK GKAIGSPPQE FNPDYFVSLA EDILQSSHLG TGSVIKPEEI  480
WSADLNAGAD MSSSSSELWS NAVIFEDPFL RVSSGLSPIW DLGSLQAGDL AGASGTDKWS  540
AAGFPFDEPD GQDNPKNGHD PENRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.14e-86HSF family protein