PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144719.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 417aa MW: 44827.4 Da PI: 8.4726

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82.2	4.5e-26	149	193	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ XP_022144719.1 149 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVEP 193 79****************************************996 PP
2	QLQ	42.7	1.7e-15	78	113	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +F+ aQ q+L+ Q+l+++y++a++ vPpeLl i+k XP_022144719.1 78 YFSVAQRQELELQALIFRYMVAGAAVPPELLHSIKK 113 79*****************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MDFHLKQCRN LGESEQQHSG KISKFLAEPS ASASALSLFV PDSDSKTSSS TILSAFPDYS 60 TSSTTATAAA LPNRMWGYFS VAQRQELELQ ALIFRYMVAG AAVPPELLHS IKKSLLSSTP 120 FFLYHPLQHF SHYPTSLLQA GYWGRAAMDP EPGRCRRTDG KKWRCSRDVV AGQKYCERHM 180 HRGRNRSRKP VEPTTAATGA GAGGGHLGSN TNRVSGRALL TAESGNGNYF SLSGQSPSVD 240 LLHLNQRGCS DSLPENKNFY ESHKGGSAGD GDGKSDGHIL RHFFDDWPRS DHGRVSNNSQ 300 QQMNSASAST TSLSISISGN PSMSSDVSLK LSTGGSSDQV PGGSSDGYRI VHQEGNADRE 360 QVQLNWAAGW AATQMASMGG PLAEALRSSA NYDSSSPTSV LHQLQRATTS EASFIST

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MDFHLKQCRN LGESEQQHSG KISKFLAEPS ASASALSLFV PDSDSKTSSS TILSAFPDYS  60
TSSTTATAAA LPNRMWGYFS VAQRQELELQ ALIFRYMVAG AAVPPELLHS IKKSLLSSTP  120
FFLYHPLQHF SHYPTSLLQA GYWGRAAMDP EPGRCRRTDG KKWRCSRDVV AGQKYCERHM  180
HRGRNRSRKP VEPTTAATGA GAGGGHLGSN TNRVSGRALL TAESGNGNYF SLSGQSPSVD  240
LLHLNQRGCS DSLPENKNFY ESHKGGSAGD GDGKSDGHIL RHFFDDWPRS DHGRVSNNSQ  300
QQMNSASAST TSLSISISGN PSMSSDVSLK LSTGGSSDQV PGGSSDGYRI VHQEGNADRE  360
QVQLNWAAGW AATQMASMGG PLAEALRSSA NYDSSSPTSV LHQLQRATTS EASFIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	2e-60	GRF family protein