PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144668.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 773aa MW: 85732.1 Da PI: 6.842

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.1e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_022144668.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 773 aa Download sequence
MQTDSIVPSI SEAHLHSETI FPHVGDQGIA ASTPDHVIEP LPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLLKDRK KTVRKRPLQG ENCPPPIPSA 180 VSSQSRALGH DGRAVKLVLV DTQNIPKLGP RKTSSRRNLN VGINRGNNGG YSTVLKPPRQ 240 RRKSDGVSSA AYKKWEKAAI AGVSLVADAA EHLERTVTNK DVLRDQNTPG KKNSDPAGSP 300 LLLLPPLQPN SLIDVANTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH 360 LSRKWGNSSA AHGELMLFPY NIQRKSLADC QRWIQDSFES AGDVYASIGR PQVFRLRYGW 420 CSNTEHGCIE FQTSVPAYGI RDDHIMDARD IEGRIVDLAS INGQPVDLNK DKVGTLNKNN 480 ISTPDAPSET ERHLSTRPND GLTGSSDPAL NISWDKKNVA DRTINQQSDD VDDLKLSNGT 540 SLSAGEWADS LTNISIGDLL SGVSHDVDAN CIDTPLPEGT QCLQQIPFSC DSFDAAIAAH 600 ISRQQDKTVT PPTLASHSSS IWDAEETCDA FSFQKNPVDL QELPSSSTFS SLRGCKHIAR 660 TNSAGHMTED DLPRPGSPTG EDYIQGDPMD ECQSDPQITE TKDINELADI YWPDSLGPLD 720 LDLPSTNKYH NEDLILSDSL SSLNRLIASS LDAFQNCSFF GFDKKESSSA FNS

Sequence ? help Back to Top

Protein Sequence Length: 773 aa Download sequence

MQTDSIVPSI SEAHLHSETI FPHVGDQGIA ASTPDHVIEP LPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLLKDRK KTVRKRPLQG ENCPPPIPSA  180
VSSQSRALGH DGRAVKLVLV DTQNIPKLGP RKTSSRRNLN VGINRGNNGG YSTVLKPPRQ  240
RRKSDGVSSA AYKKWEKAAI AGVSLVADAA EHLERTVTNK DVLRDQNTPG KKNSDPAGSP  300
LLLLPPLQPN SLIDVANTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH  360
LSRKWGNSSA AHGELMLFPY NIQRKSLADC QRWIQDSFES AGDVYASIGR PQVFRLRYGW  420
CSNTEHGCIE FQTSVPAYGI RDDHIMDARD IEGRIVDLAS INGQPVDLNK DKVGTLNKNN  480
ISTPDAPSET ERHLSTRPND GLTGSSDPAL NISWDKKNVA DRTINQQSDD VDDLKLSNGT  540
SLSAGEWADS LTNISIGDLL SGVSHDVDAN CIDTPLPEGT QCLQQIPFSC DSFDAAIAAH  600
ISRQQDKTVT PPTLASHSSS IWDAEETCDA FSFQKNPVDL QELPSSSTFS SLRGCKHIAR  660
TNSAGHMTED DLPRPGSPTG EDYIQGDPMD ECQSDPQITE TKDINELADI YWPDSLGPLD  720
LDLPSTNKYH NEDLILSDSL SSLNRLIASS LDAFQNCSFF GFDKKESSSA FNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein