PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022144421.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | HB-other | ||||||||
Protein Properties | Length: 933aa MW: 104890 Da PI: 7.011 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 40.3 | 5.5e-13 | 6 | 55 | 7 | 56 |
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 t++ql++L +++ +++yp++++ ee ++ lgLt rqV+ WF +R +++ XP_022144421.1 6 KTPQQLQALDTFYSEDKYPTQSALEEYSAALGLTYRQVQGWFAQKRRRDR 55 599*******************************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 933 aa Download sequence |
MEFKRKTPQQ LQALDTFYSE DKYPTQSALE EYSAALGLTY RQVQGWFAQK RRRDRENETT 60 VTSSTGRTLS SKYKYRTMVE GNIVKRKKKL DAIQGLHSPD YILTKVLHKD GPPLGADFDC 120 LPSGAFLQCK GTHPKNSCFS CQENQRETKV RKVSKQASSI PADCCRKTAA PVKTHGIGKG 180 LMTVWQATNP DAGDFPTGVN FGGREFMDAS PVSTSSFEES LRQGKRPARQ AKMKGRLGYK 240 VQGKRKPLTK NKRVEPYREK NQMQLCYDKC ELAWEGMRSQ GYTDHFALLV DDEELELREL 300 QAGTHTVGAC DHFMTNGANS CSLCKDMLAK FPPNSVKMKQ PFGRQPWDSL EIGKKLLKVL 360 HFLYTYATPL DICPFTLDEF AQALHDKDSF LLGKIHVTLL KLLFCDIEAE LRNAYLPHPS 420 KSCKFLALVH SLDSEVPALE VWKKSLNPLT WTEILRQVLV AAGFCSKLGV MQKETLSKEM 480 NLMAKYGLHH GTLKGELFII LSEQGNNGIK VTDLARELKI VELNVAVTTE ELELLICSTL 540 SSDITLFEKI SSSAYRLRPS LATMDVDEFQ SDTDFGSVDD IGANASICSG SYDSECDSEN 600 LFSQRFKIQK SKNENLTAFT EIDVSHPGEA WLLGLMEDEY SDLSIEEKLN ALVALIDLLS 660 DGSSIRPKGT STSCAIIEHA PDVQRYGSGA KIKKSSIRGH NLSSRTFLTS SGQLHGANVR 720 YDSLEHHPID SSTAISKFHE NSVSQGKGAN KMKDAIYLHP MQSLFLGSDR RYNRYWLFLG 780 PCNSSDPGHR RVYFESSEDG HWEVIDTEEA LCALLSVLDD RGKREAFLIE SLEQRLPFLC 840 EAMSNNSTRN LVSRNFTQSD QYDTDMIRES SYSPISDVDN SLNQTETIGN TLPSCGAIVL 900 EVKRKGEEEK QRWNRLQAFD SWMWTLSRFV LEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12750.1 | 0.0 | HB-other family protein |