PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143854.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family Dof
Protein Properties Length: 286aa    MW: 31231.6 Da    PI: 10.153
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.26.3e-3781141262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg r+n+k++
  XP_022143854.1  81 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKRN 141
                     57899*************************************************9998764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MVFPSIPSYL DPTHQWHQQQ QAAAAHQSGS GITGATSFQL LSHPLPLPPP PRAGSGAGSG  60
TVTVRPGSMA DRARMANLPA PETALKCPRC ESTNTKFCYF NNYSLSQPRH FCKTCRRYWT  120
RGGALRSVPV GGGYRRNNKR NKSSSSKSPV NSQCQPNSGD QAMRLNYRAI STPNEEAGDS  180
THPIGISNLL GFDQMIQWRP QLQLQHTQLS PLLSTSSAXL LGNGTNVSSS YNIGQIQKKM  240
EATKMEENGQ QVNDQGKPFW GVLAGNNDRH YWSTGFNPPS SSHSQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.12e-42Dof family protein