PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143738.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 481aa MW: 54794.5 Da PI: 8.7532

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.3	1e-09	359	406	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W+ I +++ Rt+ +++++w+++l XP_022143738.1 359 WTLTEVMRLVDGIAEYGTGRWTHIKKHLFatsPYRTPIDLRDKWRNLL 406 ***************************9999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MDQEVHFCQK FTNMKSHWVK VDGSFLPAPL NEPNEVEHLL VEPKSNHVLG DCLRAQDFSC 60 DFDYGIQTNR GGLDSNSKQA GEHELKFEDL DQLLADDNEV EEFHATNNLP NTYTEVAENS 120 FRRNRGLQLG NLSSESKSQG SSRNDTEAFE ISELSAAMVR EAESNNTTPV DRGLTHELCA 180 GLRTKGRCET PLDGSICSTI LDNINIHKFD TNERCLENGG LSDENVKGNI EASKLAICSR 240 DRRLRKPTRR YIEEFADSKS ESHKGKRKPP TKDKYVKVTS IEESNHIRHK VQMLTPGGES 300 HCGTSIPVQS RSQRRLPKKH VPVSGFLSEE ESSATECKIV YSSAKRCKKH DRRKHQKMWT 360 LTEVMRLVDG IAEYGTGRWT HIKKHLFATS PYRTPIDLRD KWRNLLRASC VNIQNRTGIE 420 RKQSHASRPL PKSLLQRVYE LANIYPYPKE RSPKSVKATT SPMHLIESNS LSFNWGRKKY 480 D

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MDQEVHFCQK FTNMKSHWVK VDGSFLPAPL NEPNEVEHLL VEPKSNHVLG DCLRAQDFSC  60
DFDYGIQTNR GGLDSNSKQA GEHELKFEDL DQLLADDNEV EEFHATNNLP NTYTEVAENS  120
FRRNRGLQLG NLSSESKSQG SSRNDTEAFE ISELSAAMVR EAESNNTTPV DRGLTHELCA  180
GLRTKGRCET PLDGSICSTI LDNINIHKFD TNERCLENGG LSDENVKGNI EASKLAICSR  240
DRRLRKPTRR YIEEFADSKS ESHKGKRKPP TKDKYVKVTS IEESNHIRHK VQMLTPGGES  300
HCGTSIPVQS RSQRRLPKKH VPVSGFLSEE ESSATECKIV YSSAKRCKKH DRRKHQKMWT  360
LTEVMRLVDG IAEYGTGRWT HIKKHLFATS PYRTPIDLRD KWRNLLRASC VNIQNRTGIE  420
RKQSHASRPL PKSLLQRVYE LANIYPYPKE RSPKSVKATT SPMHLIESNS LSFNWGRKKY  480
D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	247	DRRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	4e-24	MYB_related family protein