PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143422.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TCP

Protein Properties

Length: 369aa MW: 41396.4 Da PI: 8.4372

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.5	8.3e-41	101	232	3	125
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssasec...eaesssssasn 84 gkkdrhski+T++g+RdRRvRls+++a++fFdLqd+LG+dk+skt+eWL+ ++ +aik+l +t +++ ++++++ ++++ XP_022143422.1 101 GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSRKAIKDLSRTkhfgvnsyggA----KRMsldSDVEEEDQEEE 191 79***********************************************************99988855431....33333444444444444 PP TCP 85 sssgkaaksaakskksqksaasalnlakesrakarararer 125 ++ g + ++++++k +k+ + ++ l+kesrakar+r ++ XP_022143422.1 192 EQGGMLSIDHNEEEKVSKKVEVFHLLSKESRAKARERTMDK 232 444555666667777888888899999******995443 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MASSGYNLNS FSYFPPSTAS YNLPLSLPSI LGCDPSSANN NNSTFNIHQP HQDPVSFLAA 60 PYFPIGHFSG TSMPPETMIN FAVSGNNVQA LGNVPSGPTG GKKDRHSKIY TAQGLRDRRV 120 RLSIDIARKF FDLQDMLGYD KASKTLEWLF SKSRKAIKDL SRTKHFGVNS YGGAKRMSLD 180 SDVEEEDQEE EEQGGMLSID HNEEEKVSKK VEVFHLLSKE SRAKARERTM DKKQVVENNG 240 VEKIFGHRKS SGEEVSNCWN KHLDQSTETS TLPMQESVFM NKRKICAKKF IDDDNTKPDT 300 EISQWKLLDQ VKPSIGLLQE PSITKRKWRP SIISGSSQTN LLISIDGLPI NLTQNWDNSS 360 SNPNYPFPK

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MASSGYNLNS FSYFPPSTAS YNLPLSLPSI LGCDPSSANN NNSTFNIHQP HQDPVSFLAA  60
PYFPIGHFSG TSMPPETMIN FAVSGNNVQA LGNVPSGPTG GKKDRHSKIY TAQGLRDRRV  120
RLSIDIARKF FDLQDMLGYD KASKTLEWLF SKSRKAIKDL SRTKHFGVNS YGGAKRMSLD  180
SDVEEEDQEE EEQGGMLSID HNEEEKVSKK VEVFHLLSKE SRAKARERTM DKKQVVENNG  240
VEKIFGHRKS SGEEVSNCWN KHLDQSTETS TLPMQESVFM NKRKICAKKF IDDDNTKPDT  300
EISQWKLLDQ VKPSIGLLQE PSITKRKWRP SIISGSSQTN LLISIDGLPI NLTQNWDNSS  360
SNPNYPFPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-28	TCP family protein