PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143367.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 710aa    MW: 79086.9 Da    PI: 6.5997
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.56.5e-202883156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t++q+++Le++F+++++p++++r++L+++lgL+++q+k+WFqN+R++ k
  XP_022143367.1 28 KKSYHRHTPYQIQQLESFFRECPHPDENQRRQLSRELGLETKQIKFWFQNKRTQTK 83
                    688899**********************************************9987 PP
2START139.24.4e-442274473206
                     HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS
           START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 
                     a +a++el+++   +ep+W+k +     ++ +d + ++f++ +       ++e ++ sgvv+m +++lv ++ld   +W   ++     aetl  
  XP_022143367.1 227 ATTALEELIRLLRIDEPLWTKTPndgrYILHRDSYDKIFPRPNHfkatsARTESSKNSGVVTMSAMQLVDSFLDAD-KWADLFPtviiNAETLHI 320
                     67899******************888888888888888877666899999**************************.99999999999******* PP

                     ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
           START  85 issg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                     i++g      g+lqlm+ ++ + splv+ Rdf f+R+++q + g+wvivdvS +  ++  +   ++R+ +lpSg++i++++ng sk+twvehv++
  XP_022143367.1 321 IDPGmpgnrsGTLQLMYEQMHVFSPLVSpRDFCFLRHCQQIELGVWVIVDVSYEILKDCIT---SARCWRLPSGCMIQEMPNGCSKLTWVEHVEV 412
                     *************************9999************************99999764...9****************************** PP

                     -SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 173 kgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     ++++  h l+r +v +++a ga +wv tlqr ce+
  XP_022143367.1 413 DDKTQtHRLYRDVVFNTTAYGAERWVFTLQRMCER 447
                     **9998***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 710 aa     Download sequence    
MDFVMEGRGG NGAGSGDEQE ASNDRKGKKS YHRHTPYQIQ QLESFFRECP HPDENQRRQL  60
SRELGLETKQ IKFWFQNKRT QTKAQNERAD NSVLRTENEK IQCENLAIRE ALRNVICPSC  120
GGPPFGEEER QRNLQKLRLE NSHLKEEHEK VSNLLAKYIG KPISQLESLL PVLGSSLDLS  180
PRSSLNQRVG SPAVDLIPDP VILNGTATPY QSRGINDLEN ALMLETATTA LEELIRLLRI  240
DEPLWTKTPN DGRYILHRDS YDKIFPRPNH FKATSARTES SKNSGVVTMS AMQLVDSFLD  300
ADKWADLFPT VIINAETLHI IDPGMPGNRS GTLQLMYEQM HVFSPLVSPR DFCFLRHCQQ  360
IELGVWVIVD VSYEILKDCI TSARCWRLPS GCMIQEMPNG CSKLTWVEHV EVDDKTQTHR  420
LYRDVVFNTT AYGAERWVFT LQRMCERLAY TFRDSVPGHE LEGVFTSLEG RRSIMKLSHR  480
MVKNFCGVLS MSGKLDFPQL SEVNNSGVRI SVRISTELGQ PSGTIVSAAT SLWLPLQPES  540
IFNFFRDEKA RVQWDVLSNG NPVHEIAHIL TGVHPGNSIS IIRPFVPTEN NMLILQESCT  600
DPLGSLVIYA PVDMPAMNVA VSGQDSSEIP ILPSGFVISG DGRAHLGGGA STSATLGRPS  660
GSLLTVAFQI LVSSVSSSRQ LNVESVATVN TLISATVQRI KAALNCSGLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein