PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143273.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 270aa    MW: 30333.9 Da    PI: 4.1322
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF282.8e-091222142
                    HHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF 21 lKKAeELSvLCdaevaviifss 42
                    +KKA+ELS+LCd++ +v+i ++
  XP_022143273.1  1 MKKAFELSTLCDVRTCVLIHGP 22
                    8******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MKKAFELSTL CDVRTCVLIH GPAPPQDGDC SAVESHTWPL NREEIEGIIR AYKTSYFQKP  60
LMKSFDLYGY FSDRMKKIEA ERAKFRNDAE DIKCPSWDER LECLSGHQLR LVMEDLGSKS  120
EVAEGMIGFM EGVSAIDFIC GSTENQTPNT ENSTIEGASA TDFIGGPTEN QTSNSENSTI  180
DSQWFPFHDG LQTEEALLMM PDHDFSNLLF GTNGVDYTYE HLLSNEMMME NNNMGEFQSA  240
APLQPILPLS YLQCASDYSQ MMNNAFSVEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58890.11e-09M-type_MADS family protein