PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143204.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 395aa MW: 43213.1 Da PI: 9.5462

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2.1e-05	160	182	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg++F+ +nL+ H+ + H XP_022143204.1 160 PCPQCGEVFPKIENLELHQAVrH 182 7******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MALLTSSNQK KPASNKRRKK PQNQSSWDQI KNLLTCKQLE VHDPAKRSPA YSKLGSSCSS 60 ICSFRDVVHA NARVVHRADN SPETSSVGQE TRLLTRKPAN GSSSRSLTPP PPPPRNKNGA 120 SSATSYSSRG IQFRKLSGCY ECHTIVDPTR YPVPRSSICP CPQCGEVFPK IENLELHQAV 180 RHAVSELGPD DSGRNIVEII FKSSWLKKDS PICKIERILK VHNTQRTIQR FEDCRDAVKT 240 RALGSTRKNP RCAADGNELL RFQCSTLWCD LGSRGSTGLC GSIPGCGVCS VIRHGFQGAA 300 VPVRTTASSG RAHDSFDCSD GRRRAMLVCR VIAGRVKRIA DDTAAGAAED ENMAAASYDS 360 VSRHSGIYSN LEELVIFNPR AILPCFVVIY EALQS

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MALLTSSNQK KPASNKRRKK PQNQSSWDQI KNLLTCKQLE VHDPAKRSPA YSKLGSSCSS  60
ICSFRDVVHA NARVVHRADN SPETSSVGQE TRLLTRKPAN GSSSRSLTPP PPPPRNKNGA  120
SSATSYSSRG IQFRKLSGCY ECHTIVDPTR YPVPRSSICP CPQCGEVFPK IENLELHQAV  180
RHAVSELGPD DSGRNIVEII FKSSWLKKDS PICKIERILK VHNTQRTIQR FEDCRDAVKT  240
RALGSTRKNP RCAADGNELL RFQCSTLWCD LGSRGSTGLC GSIPGCGVCS VIRHGFQGAA  300
VPVRTTASSG RAHDSFDCSD GRRRAMLVCR VIAGRVKRIA DDTAAGAAED ENMAAASYDS  360
VSRHSGIYSN LEELVIFNPR AILPCFVVIY EALQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-151	C2H2 family protein