PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022143120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ARR-B | ||||||||
Protein Properties | Length: 701aa MW: 77212.6 Da PI: 6.1039 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.7 | 1.1e-27 | 214 | 267 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++F+ av++L G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYR XP_022143120.1 214 KPRVDWNGELHRKFIAAVNHL-GIEKAVPKKILDLMNVEGLTRENVASHLQKYRQ 267 79*******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 32.5 | 1.9e-10 | 216 | 266 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W e++ +++ av+ lG + +k+I m+ +g+t++++ s++qky+ XP_022143120.1 216 RVDWNGELHRKFIAAVNHLGIEkaVPKKILDLMNvEGLTRENVASHLQKYR 266 567999********************************************7 PP | |||||||
3 | Response_reg | 84.5 | 3.2e-28 | 30 | 138 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l vdD+p+ +++l+++l+k +y +v+++ ++ eal++l++++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ e++ + + G XP_022143120.1 30 ILAVDDDPICLKVLENLLRKCQY-RVTSTNQAAEALKMLRKNRnkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMMSAHSDFELVAKGVTHG 122 799********************.***************998889*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_022143120.1 123 ACDYLLKPVRIEELKN 138 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 701 aa Download sequence |
MPLAMTVEDK RANLGGANGD VDQFPIGMSI LAVDDDPICL KVLENLLRKC QYRVTSTNQA 60 AEALKMLRKN RNKFDLVISD VNMPDMDGFK LLELVGLEMD LPVIMMSAHS DFELVAKGVT 120 HGACDYLLKP VRIEELKNIW QHVFRRDKFS AKNQNKCTNG NKASCQTVEV AKGFPSVVGA 180 GNGKPGKRRK DQDDNEEGGE EENSYENDDS TQKKPRVDWN GELHRKFIAA VNHLGIEKAV 240 PKKILDLMNV EGLTRENVAS HLQKYRQYLK KMCTREAQQH NMMAAFGGKD TSFRPPMASL 300 NGFSMTGTRR LSNTTFSSYP SGEIVGRLNS TAGLSLHGIA SSGMIQQGTF HNSSSLLDTF 360 GKLYPALFLS NRPPSIFDGI STSSDCIQPL QDRHTMQFKD FNLINDASSF TVSTSCPDAR 420 VTVGSSSNYD LGISSHPSML QGHKQQIHGS GELGDQSPLN VSLINPESLD RSTGLSNILC 480 HGQSNRNWQG SIQLSKLASN FSLTGIYPPD GMPTINLTIS STQPDNDNFP VGFPSTSVDS 540 SSQLDLRGET QCYEELIGSV VETMNGRPEQ QWEVAKQDYN SNHSSSVRKS LVSVDGIADP 600 LRQSTDQKKY RKIGSSFTNQ LDTGAPSFIQ HSAEISAIDT WMNYDGKILM DPTKLQNGFK 660 NASFNSLEEL VNAMSKQEQD QSIQMNDEFG FDAQSLGSSC I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-107 | ARR-B family protein |