PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143019.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 441aa MW: 46516.9 Da PI: 6.8723

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37	6.1e-12	247	292	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022143019.1 247 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 292 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MRLTNSLSDL HSHHHRNRRP ESDAPQLQSH LHSSHFDPPT FSHDDFFDQM LSTIPPSWEL 60 PPSGALSDDA PPPPPPPQPN PDNTAFQFDE SSSATNLASK LSGYQISETT AKMAMTMLQQ 120 QLLMSRAMVT AADSGLLPMP GANLEDSSSF KCPNPIGDGS VPSLYNEFAG YLNASGSSHN 180 HNHNHNQSQY LHLPQAGNSQ KQSFGAPVAV NNPPPSNAPA GHGSGGAAPA QPRQRVRARR 240 GQATDPHSIA ERLRRERIAE RMKALQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM 300 SRLGGATAAM PSLVADISSE GGTDCNLSNG AGGAAGRTSA GAPSTNDAMT VTEHQVVKLM 360 EEDMGSAMQY LQGKGLCLMP ISLATAISTA TCHSRPIVAS KGGGGEGPTS PGMSSLTVQS 420 TTLGNGAINR AVKDAASVSR P

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MRLTNSLSDL HSHHHRNRRP ESDAPQLQSH LHSSHFDPPT FSHDDFFDQM LSTIPPSWEL  60
PPSGALSDDA PPPPPPPQPN PDNTAFQFDE SSSATNLASK LSGYQISETT AKMAMTMLQQ  120
QLLMSRAMVT AADSGLLPMP GANLEDSSSF KCPNPIGDGS VPSLYNEFAG YLNASGSSHN  180
HNHNHNQSQY LHLPQAGNSQ KQSFGAPVAV NNPPPSNAPA GHGSGGAAPA QPRQRVRARR  240
GQATDPHSIA ERLRRERIAE RMKALQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM  300
SRLGGATAAM PSLVADISSE GGTDCNLSNG AGGAAGRTSA GAPSTNDAMT VTEHQVVKLM  360
EEDMGSAMQY LQGKGLCLMP ISLATAISTA TCHSRPIVAS KGGGGEGPTS PGMSSLTVQS  420
TTLGNGAINR AVKDAASVSR P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	252	257	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-62	bHLH family protein