PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022142968.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | YABBY | ||||||||
Protein Properties | Length: 153aa MW: 17270 Da PI: 9.0126 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 130.5 | 2.3e-40 | 48 | 127 | 93 | 170 |
YABBY 93 stsvsseklsenede..evprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s+ ++++k+ ++ p + ++rPPekrqrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl XP_022142968.1 48 SKCNNKMKMRATIKNptXDPDQRVINRPPEKRQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGL 127 33333333433333300333445589****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MSSCINSQQE QLCYIPCNFC NIVLAGSGHT HSHGGSAADY XVELGSSSKC NNKMKMRATI 60 KNPTXDPDQR VINRPPEKRQ RVPSAYNQFI KEEIQRIKAK NPDITHREAF STAAKNWAHF 120 PHIHFGLMLE TNNLQTKNDG SEKHLMSVPG LHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 1e-50 | YABBY family protein |