PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142603.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 291aa    MW: 32628.8 Da    PI: 4.2211
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.5e-07168212655
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                      ++ r RR++i  + +eL el+P  +      K++ ae+L  A +Y+k Lq
  XP_022142603.1 168 TIAARERRRKITAKTQELGELIPGgN------KMNTAEMLHSAFKYVKFLQ 212
                     56789******************955......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MAALSFYSNF CSDPLFFSPD FSPELFYLTP TLPQLLPDPA FDYFPTAVDN TVFFPPLLDD  60
DASSSFFFSD VYPYFSAPAI ADCFVPVSTE FFPSDEFELH CPKRQRIVSE QNFGYGGSGG  120
GGGGGYFPPL PELLPVPWDD KMNNAETMNA GTCLKSKQSP SNTLSAQTIA ARERRRKITA  180
KTQELGELIP GGNKMNTAEM LHSAFKYVKF LQAQVGILQL MQETEQVKEE KEEEEETEEL  240
QILESAMVQE KLYAEEKCLV PKGFVQNLAN FPEIQSHPSI FNSINQMLHM Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.11e-26bHLH family protein