PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142412.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 327aa MW: 37107.3 Da PI: 8.6204

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	9.4e-06	168	187	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+ksF+r n++ H+ XP_022142412.1 168 FACSICNKSFNRYNNMQMHM 187 78*****************9 PP
2	zf-C2H2	10.9	0.0014	252	274	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+ k + ++H +++ XP_022142412.1 252 FMCRKCGKTLAVKGDWRTHEKNC 274 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MGLRNHMAEE NIFCLQSPNF IEWLKPHSPS SSSSPSISLS SSSSSSSSLR NDRNFISRTI 60 QCVAGSNPDQ ECFASRCLPL FLETKASMKK EEEGQYLEVK EEDGDREKVE VGLHIGLPNM 120 GDVLVAERNM NVCVKKEESV KKSFPSFNTQ GRFWIPTPAQ ILVGPMQFAC SICNKSFNRY 180 NNMQMHMWGH GSEYRKGPES LRGTQPAAML RLPCFCCAQG CKNNINHPRA KPLKDFRTLQ 240 THYKRKHGSK PFMCRKCGKT LAVKGDWRTH EKNCGKLWFC TCGSDFKHKR SLKDHIRSFG 300 KGHSPLCPVL EDHDKEYCLT ASEQEDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-106	C2H2 family protein