PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142375.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HSF

Protein Properties

Length: 406aa MW: 46979.1 Da PI: 5.8755

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.6	1.1e-34	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d++++ ++sw+++++sf+v+++ ef++++Lp++Fkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F+kg+ +ll++ XP_022142375.1 14 FLTKTYEMVNDPSTDPVVSWTSSNKSFIVWNPLEFSSDLLPRFFKHNNFSSFIRQLNTYGFRKVDPER---------WEFANEDFEKGRPDLLRN 99 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_022142375.1 100 IHRRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MDEAQGSANT LPPFLTKTYE MVNDPSTDPV VSWTSSNKSF IVWNPLEFSS DLLPRFFKHN 60 NFSSFIRQLN TYGFRKVDPE RWEFANEDFE KGRPDLLRNI HRRKPVHSHS LQNVQGQGLS 120 SSLLDLERKR FKEEVERLKH TNEKLLLESE KHELEHRELQ LQMQSMKERF QCVQQQQQTL 180 LSNVAHVLKK PELTIYFVPE SESHDRKRRL ASVTYYYNES SAEDDQIEHS HSMSKQHTDY 240 SSASDLNMEQ IDQLESSLTF WERTIHDVDQ SITRPTLKSN QIESGIKSPL IPSVQLDRNL 300 QSKSHDIDMN SEPVGSNASD PFASRKEAGE TTANMRNGAN DMFWEQFLTE NPGSSDPPRV 360 AFEGKDSDNG RKNESKSIGF GKLWWTANKI NNLTEQMEHL TPTEKT

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MDEAQGSANT LPPFLTKTYE MVNDPSTDPV VSWTSSNKSF IVWNPLEFSS DLLPRFFKHN  60
NFSSFIRQLN TYGFRKVDPE RWEFANEDFE KGRPDLLRNI HRRKPVHSHS LQNVQGQGLS  120
SSLLDLERKR FKEEVERLKH TNEKLLLESE KHELEHRELQ LQMQSMKERF QCVQQQQQTL  180
LSNVAHVLKK PELTIYFVPE SESHDRKRRL ASVTYYYNES SAEDDQIEHS HSMSKQHTDY  240
SSASDLNMEQ IDQLESSLTF WERTIHDVDQ SITRPTLKSN QIESGIKSPL IPSVQLDRNL  300
QSKSHDIDMN SEPVGSNASD PFASRKEAGE TTANMRNGAN DMFWEQFLTE NPGSSDPPRV  360
AFEGKDSDNG RKNESKSIGF GKLWWTANKI NNLTEQMEHL TPTEKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	9e-89	HSF family protein