PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142356.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 357aa    MW: 39182.4 Da    PI: 7.6443
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142356.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00024134155323
                     ETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                     C+ Cg +F++++  ++H  + H
  XP_022142356.1 134 CQECGVVFKNPDAVESHHLSkH 155
                     *****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MPEVWCTLKK SLSCTKSFLC DVHEPEAIGN SIAKERTERD PSGCLRSKSN LRDIICGSKR  60
HSEKPSPGSS SRSMATSEVL HSIIHEIEAQ IKTDNSSVSH PGKAPIKPDT RNGHAISATS  120
DSINQFNNGY ESICQECGVV FKNPDAVESH HLSKHAVEEL VQGDSSRKVI ELICQRNWAM  180
SKPHHIEKVF KVRNSPKTLS LFEEHREVVK SKARKLKKKE NPRCLVDGNE LLGFHGTRIA  240
CPLAADGSQI LCDLDSCGVC QVLRHGFNGA IICATSGRAL ESIVVNEEEE GLRRALMVCR  300
VIAGRIHGGG VEKDEEANDN SGLDSSGGET GRSPNPEEFH VFNPRAVLPC FVVTYKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.12e-68C2H2 family protein