PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142355.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 389aa    MW: 42260.9 Da    PI: 5.3748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.4e-052853171754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk L
  XP_022142355.1 285 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 317
                     55666677777776.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MGEDFQAGIC SDNWWSSSRV AIGGLSPCSV GIADFGWPPS DDHFPDIKPK PSDNSMAFQD  60
HSAATFPTSD WNQTDDLLCG GGRGESNFNY SPTNMDYCEV NSIKYSSSSS SCQGLFPVDS  120
TTLYGYPSKL QLPSLYDDPQ SHTLFNTTTS DLSLSSTPNF PSNYGLKPSL PKQPQAQPIS  180
SGLHFTNNTP FWNASAAAST DNIPQAIVSS GQLLASILED RNPKCQNSTL ALKVISSANC  240
EDGQEAIKKG DHNKNGTAEP PVFKRARIET PSPLPTFKVR KEKLGDRVTA LQQLVSPFGK  300
TDTASVLHEA IEYIKFLHDQ VGVLSTPYMK NNNGTPVQHQ QVCEKAEGDR GKEDLRSRGL  360
CLVPISSTFP VTNATTPDFW TPTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.11e-56bHLH family protein