PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142354.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GeBP

Protein Properties

Length: 411aa MW: 44978.1 Da PI: 6.25

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142354.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	132.5	1.6e-41	177	273	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 klfqrlwse+Dei++L G+id+ +k+g++p d++af++f+kks++++v++ ql++KirrLKkK++++ ++ k+g +p+f+k+h+qk felskki XP_022142354.1 177 KLFQRLWSEDDEIAILNGMIDYSTKKGADPALDMNAFHDFIKKSLHVDVTRAQLMDKIRRLKKKYRNNADRGKKGADPTFTKPHEQKGFELSKKI 271 579******************************************************************************************** PP DUF573 96 Wg 97 Wg XP_022142354.1 272 WG 273 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MAPKRPSPLD EPPAASSSEE EETSSGEEEE GVSRDGSSSE EEEDEEETQA PKTKKSSALP 60 STPAVEKKAA PKKSDLPTNS QAQSSSSESG SGSDSDSDSE SGRNVKPIAT KPMEETPKVK 120 KPRSKPSTSA TPARSALKRP SETTKDAKRA KKSSEADADD SVVAEDDSKK SVDESKKLFQ 180 RLWSEDDEIA ILNGMIDYST KKGADPALDM NAFHDFIKKS LHVDVTRAQL MDKIRRLKKK 240 YRNNADRGKK GADPTFTKPH EQKGFELSKK IWGGEGTART PIVEQPKPNA NGTPKKNQRG 300 STSRSLASLK AELLPSPDAP KEDDKMKIDD NEIPSGCLNG FVAFERALGA VGLPESFLKP 360 GLELIGQSKR TELEEEWKKV HLAELELFLK RTELIRDQAK LILEAYKSSN K

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MAPKRPSPLD EPPAASSSEE EETSSGEEEE GVSRDGSSSE EEEDEEETQA PKTKKSSALP  60
STPAVEKKAA PKKSDLPTNS QAQSSSSESG SGSDSDSDSE SGRNVKPIAT KPMEETPKVK  120
KPRSKPSTSA TPARSALKRP SETTKDAKRA KKSSEADADD SVVAEDDSKK SVDESKKLFQ  180
RLWSEDDEIA ILNGMIDYST KKGADPALDM NAFHDFIKKS LHVDVTRAQL MDKIRRLKKK  240
YRNNADRGKK GADPTFTKPH EQKGFELSKK IWGGEGTART PIVEQPKPNA NGTPKKNQRG  300
STSRSLASLK AELLPSPDAP KEDDKMKIDD NEIPSGCLNG FVAFERALGA VGLPESFLKP  360
GLELIGQSKR TELEEEWKKV HLAELELFLK RTELIRDQAK LILEAYKSSN K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	7e-40	GeBP family protein