PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142048.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HB-other

Protein Properties

Length: 1754aa MW: 199125 Da PI: 4.8698

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.7e-19	31	86	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps+++r+eL++klgLt+rq ++WF+ rR k+kk XP_022142048.1 31 PKRQMKTPFQLETLEKAYALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1754 aa Download sequence
MEAAASDGEN HNQNNDNINK ISNSSEGLSK PKRQMKTPFQ LETLEKAYAL ETYPSESTRA 60 ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRKMVAPAL PDSPIDELRV VAEPGSDYAS 120 GSGSGSSPFG DVGLRNVVPR SVGDDMPPMR RYYEPSRSVM EHRAIACVES QLGEPLREDG 180 PILGIEFDPL PPDAFGAPIV AEQQKRSAHS YGDKYEQRDA KSNKATTRAF PEYSFLPDQS 240 NLRADAYGPV AQSHYPDSLV EVSAGRTPSF LLGHEQLNRS HNYHGQVSRV RLLPQQEKQG 300 VTIPPPAEDS AFVPARDSFA SIRMNSQFTD HSIVGPENQY VLPDGHXFPN DVIIRMERKR 360 KSDEARMNKE AEAHEIRMRK ELEKQDILRK KSEERMRKEM EKQDRERRRE EERLLREKQR 420 EAERLKREER REHERREKFL QREYLRAEKR RQKEALRKEK EAVRRKAAIE KATARRIARE 480 SMELIEDEQL ELMELAAANK GLSSILSLDH DTLQNLESFR DYLVAFPPKS VQLKIPFSIQ 540 PWINSEENIG NLLMVWRFFI TFSDVLELWP FTLDEFVQAL HDYDSRLLGE IHICLLRLIV 600 KDIEDVARTP STGLGINQNG VANTGGGHPQ IVEGAYAWGF DICNWQKHLN TLTWPEIFRQ 660 LALSAGFGPQ LKKRSLAWPE MHGNDEAKCG EDVVSTLRNG SAAENAFAIM QEKGLLAPRR 720 SRHRLTPGTV KFAAFHVLSL EGSEGLTVLE LADKIQRSGL RDLSTSKTPE ASISVALTRD 780 TKLFERIAPS TYRVRAPYRK DPDDAEEILS VARKKIQIFQ NGFLAGEDAD DVERDEESEC 840 DDVDEDPEVD DLATTALMNE DVNKGDTNLE VENENSCHVI VGNSQNEGVK DLSSSPLSGS 900 KDVKYLDITT EQYAAVDETT TSDLDQENME IDESKEGESW IQGLTEGEYH DLSVEERLNA 960 LVVLTSIANE GNSIRLVLED RLEAANAVKK QMLAEAQIDK SRLKEEIINK SDFPIHMVSK 1020 VETELNGSTM EGGQSPLPVA XNKNNETIPS TAENLGSVPN ERATLVADLF PGPDNCLSHQ 1080 YGHASKRSRS QLKSYIAHRA EEMYTYRSLP LGRDRRRNRY WQFVASSSSN DPGSGRIFVE 1140 MYDGKWRLID SEEDFDALSM ALDTRGVRES HLRIMLQMIE TSFKENVRRN LQCANFLVQS 1200 GTTPKNENDE SSSSPDCNTV FNSPSSTVCG LNLDTMVTSS SFRIELGRNE NEKKAAFRRY 1260 QDLQRWMLRE SFNTATLCAM KFGEKRCTQL LDICDFCLCL FDSEHSHCTS CHQTFDTSGN 1320 DINFFEHKLH CERERKSYHW DTHTLDASLP LKSRLVKAVL AVIEAHVPSE AFLSFWTERR 1380 KNWGVRMDMS SSIEELLQIL TLFESVIKRD FLKSDFTTTD EHLSSCSVSG NVIHDQSDVG 1440 SVLTLPWIPR TSAALALRLF EVDASXYYIG CEKPEPDQYK ETGEYMNFPS RYVQVKNDER 1500 NKLNELDYDD LMKKENSADP KSSRNSYKRG RGSRDHGRRR RWQKKVNGSK SGRVRQHVKS 1560 NEKMNQGPRQ LGQGTQVMGV RGRRTVRKRR AEKSIQDEGL LGIVPSSTQN RDESPKDFIG 1620 EWEDEKIDGF VDMEDEENVL EDEENVLEDE ENEENEENVN NVEPMDSDDD AHAVGYERGS 1680 WDFGFDGTSN RWNGDLGIAS DEDVDLSEDY NGTEEAGNDD LELDVDTSEE SDCSPNRIGN 1740 NGGGESPVSD DYSD

Sequence ? help Back to Top

Protein Sequence Length: 1754 aa Download sequence

MEAAASDGEN HNQNNDNINK ISNSSEGLSK PKRQMKTPFQ LETLEKAYAL ETYPSESTRA  60
ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRKMVAPAL PDSPIDELRV VAEPGSDYAS  120
GSGSGSSPFG DVGLRNVVPR SVGDDMPPMR RYYEPSRSVM EHRAIACVES QLGEPLREDG  180
PILGIEFDPL PPDAFGAPIV AEQQKRSAHS YGDKYEQRDA KSNKATTRAF PEYSFLPDQS  240
NLRADAYGPV AQSHYPDSLV EVSAGRTPSF LLGHEQLNRS HNYHGQVSRV RLLPQQEKQG  300
VTIPPPAEDS AFVPARDSFA SIRMNSQFTD HSIVGPENQY VLPDGHXFPN DVIIRMERKR  360
KSDEARMNKE AEAHEIRMRK ELEKQDILRK KSEERMRKEM EKQDRERRRE EERLLREKQR  420
EAERLKREER REHERREKFL QREYLRAEKR RQKEALRKEK EAVRRKAAIE KATARRIARE  480
SMELIEDEQL ELMELAAANK GLSSILSLDH DTLQNLESFR DYLVAFPPKS VQLKIPFSIQ  540
PWINSEENIG NLLMVWRFFI TFSDVLELWP FTLDEFVQAL HDYDSRLLGE IHICLLRLIV  600
KDIEDVARTP STGLGINQNG VANTGGGHPQ IVEGAYAWGF DICNWQKHLN TLTWPEIFRQ  660
LALSAGFGPQ LKKRSLAWPE MHGNDEAKCG EDVVSTLRNG SAAENAFAIM QEKGLLAPRR  720
SRHRLTPGTV KFAAFHVLSL EGSEGLTVLE LADKIQRSGL RDLSTSKTPE ASISVALTRD  780
TKLFERIAPS TYRVRAPYRK DPDDAEEILS VARKKIQIFQ NGFLAGEDAD DVERDEESEC  840
DDVDEDPEVD DLATTALMNE DVNKGDTNLE VENENSCHVI VGNSQNEGVK DLSSSPLSGS  900
KDVKYLDITT EQYAAVDETT TSDLDQENME IDESKEGESW IQGLTEGEYH DLSVEERLNA  960
LVVLTSIANE GNSIRLVLED RLEAANAVKK QMLAEAQIDK SRLKEEIINK SDFPIHMVSK  1020
VETELNGSTM EGGQSPLPVA XNKNNETIPS TAENLGSVPN ERATLVADLF PGPDNCLSHQ  1080
YGHASKRSRS QLKSYIAHRA EEMYTYRSLP LGRDRRRNRY WQFVASSSSN DPGSGRIFVE  1140
MYDGKWRLID SEEDFDALSM ALDTRGVRES HLRIMLQMIE TSFKENVRRN LQCANFLVQS  1200
GTTPKNENDE SSSSPDCNTV FNSPSSTVCG LNLDTMVTSS SFRIELGRNE NEKKAAFRRY  1260
QDLQRWMLRE SFNTATLCAM KFGEKRCTQL LDICDFCLCL FDSEHSHCTS CHQTFDTSGN  1320
DINFFEHKLH CERERKSYHW DTHTLDASLP LKSRLVKAVL AVIEAHVPSE AFLSFWTERR  1380
KNWGVRMDMS SSIEELLQIL TLFESVIKRD FLKSDFTTTD EHLSSCSVSG NVIHDQSDVG  1440
SVLTLPWIPR TSAALALRLF EVDASXYYIG CEKPEPDQYK ETGEYMNFPS RYVQVKNDER  1500
NKLNELDYDD LMKKENSADP KSSRNSYKRG RGSRDHGRRR RWQKKVNGSK SGRVRQHVKS  1560
NEKMNQGPRQ LGQGTQVMGV RGRRTVRKRR AEKSIQDEGL LGIVPSSTQN RDESPKDFIG  1620
EWEDEKIDGF VDMEDEENVL EDEENVLEDE ENEENEENVN NVEPMDSDDD AHAVGYERGS  1680
WDFGFDGTSN RWNGDLGIAS DEDVDLSEDY NGTEEAGNDD LELDVDTSEE SDCSPNRIGN  1740
NGGGESPVSD DYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein