PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142047.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HB-other

Protein Properties

Length: 1761aa MW: 199922 Da PI: 4.871

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.7e-19	31	86	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps+++r+eL++klgLt+rq ++WF+ rR k+kk XP_022142047.1 31 PKRQMKTPFQLETLEKAYALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1761 aa Download sequence
MEAAASDGEN HNQNNDNINK ISNSSEGLSK PKRQMKTPFQ LETLEKAYAL ETYPSESTRA 60 ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRKMVAPAL PDSPIDELRV VAEPGSDYAS 120 GSGSGSSPFG DVGLRNVVPR SVGDDMPPMR RYYEPSRSVM EHRAIACVES QLGEPLREDG 180 PILGIEFDPL PPDAFGAPIV SYCDKTVAEQ QKRSAHSYGD KYEQRDAKSN KATTRAFPEY 240 SFLPDQSNLR ADAYGPVAQS HYPDSLVEVS AGRTPSFLLG HEQLNRSHNY HGQVSRVRLL 300 PQQEKQGVTI PPPAEDSAFV PARDSFASIR MNSQFTDHSI VGPENQYVLP DGHXFPNDVI 360 IRMERKRKSD EARMNKEAEA HEIRMRKELE KQDILRKKSE ERMRKEMEKQ DRERRREEER 420 LLREKQREAE RLKREERREH ERREKFLQRE YLRAEKRRQK EALRKEKEAV RRKAAIEKAT 480 ARRIARESME LIEDEQLELM ELAAANKGLS SILSLDHDTL QNLESFRDYL VAFPPKSVQL 540 KIPFSIQPWI NSEENIGNLL MVWRFFITFS DVLELWPFTL DEFVQALHDY DSRLLGEIHI 600 CLLRLIVKDI EDVARTPSTG LGINQNGVAN TGGGHPQIVE GAYAWGFDIC NWQKHLNTLT 660 WPEIFRQLAL SAGFGPQLKK RSLAWPEMHG NDEAKCGEDV VSTLRNGSAA ENAFAIMQEK 720 GLLAPRRSRH RLTPGTVKFA AFHVLSLEGS EGLTVLELAD KIQRSGLRDL STSKTPEASI 780 SVALTRDTKL FERIAPSTYR VRAPYRKDPD DAEEILSVAR KKIQIFQNGF LAGEDADDVE 840 RDEESECDDV DEDPEVDDLA TTALMNEDVN KGDTNLEVEN ENSCHVIVGN SQNEGVKDLS 900 SSPLSGSKDV KYLDITTEQY AAVDETTTSD LDQENMEIDE SKEGESWIQG LTEGEYHDLS 960 VEERLNALVV LTSIANEGNS IRLVLEDRLE AANAVKKQML AEAQIDKSRL KEEIINKSDF 1020 PIHMVSKVET ELNGSTMEGG QSPLPVAXNK NNETIPSTAE NLGSVPNERA TLVADLFPGP 1080 DNCLSHQYGH ASKRSRSQLK SYIAHRAEEM YTYRSLPLGR DRRRNRYWQF VASSSSNDPG 1140 SGRIFVEMYD GKWRLIDSEE DFDALSMALD TRGVRESHLR IMLQMIETSF KENVRRNLQC 1200 ANFLVQSGTT PKNENDESSS SPDCNTVFNS PSSTVCGLNL DTMVTSSSFR IELGRNENEK 1260 KAAFRRYQDL QRWMLRESFN TATLCAMKFG EKRCTQLLDI CDFCLCLFDS EHSHCTSCHQ 1320 TFDTSGNDIN FFEHKLHCER ERKSYHWDTH TLDASLPLKS RLVKAVLAVI EAHVPSEAFL 1380 SFWTERRKNW GVRMDMSSSI EELLQILTLF ESVIKRDFLK SDFTTTDEHL SSCSVSGNVI 1440 HDQSDVGSVL TLPWIPRTSA ALALRLFEVD ASXYYIGCEK PEPDQYKETG EYMNFPSRYV 1500 QVKNDERNKL NELDYDDLMK KENSADPKSS RNSYKRGRGS RDHGRRRRWQ KKVNGSKSGR 1560 VRQHVKSNEK MNQGPRQLGQ GTQVMGVRGR RTVRKRRAEK SIQDEGLLGI VPSSTQNRDE 1620 SPKDFIGEWE DEKIDGFVDM EDEENVLEDE ENVLEDEENE ENEENVNNVE PMDSDDDAHA 1680 VGYERGSWDF GFDGTSNRWN GDLGIASDED VDLSEDYNGT EEAGNDDLEL DVDTSEESDC 1740 SPNRIGNNGG GESPVSDDYS D

Sequence ? help Back to Top

Protein Sequence Length: 1761 aa Download sequence

MEAAASDGEN HNQNNDNINK ISNSSEGLSK PKRQMKTPFQ LETLEKAYAL ETYPSESTRA  60
ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRKMVAPAL PDSPIDELRV VAEPGSDYAS  120
GSGSGSSPFG DVGLRNVVPR SVGDDMPPMR RYYEPSRSVM EHRAIACVES QLGEPLREDG  180
PILGIEFDPL PPDAFGAPIV SYCDKTVAEQ QKRSAHSYGD KYEQRDAKSN KATTRAFPEY  240
SFLPDQSNLR ADAYGPVAQS HYPDSLVEVS AGRTPSFLLG HEQLNRSHNY HGQVSRVRLL  300
PQQEKQGVTI PPPAEDSAFV PARDSFASIR MNSQFTDHSI VGPENQYVLP DGHXFPNDVI  360
IRMERKRKSD EARMNKEAEA HEIRMRKELE KQDILRKKSE ERMRKEMEKQ DRERRREEER  420
LLREKQREAE RLKREERREH ERREKFLQRE YLRAEKRRQK EALRKEKEAV RRKAAIEKAT  480
ARRIARESME LIEDEQLELM ELAAANKGLS SILSLDHDTL QNLESFRDYL VAFPPKSVQL  540
KIPFSIQPWI NSEENIGNLL MVWRFFITFS DVLELWPFTL DEFVQALHDY DSRLLGEIHI  600
CLLRLIVKDI EDVARTPSTG LGINQNGVAN TGGGHPQIVE GAYAWGFDIC NWQKHLNTLT  660
WPEIFRQLAL SAGFGPQLKK RSLAWPEMHG NDEAKCGEDV VSTLRNGSAA ENAFAIMQEK  720
GLLAPRRSRH RLTPGTVKFA AFHVLSLEGS EGLTVLELAD KIQRSGLRDL STSKTPEASI  780
SVALTRDTKL FERIAPSTYR VRAPYRKDPD DAEEILSVAR KKIQIFQNGF LAGEDADDVE  840
RDEESECDDV DEDPEVDDLA TTALMNEDVN KGDTNLEVEN ENSCHVIVGN SQNEGVKDLS  900
SSPLSGSKDV KYLDITTEQY AAVDETTTSD LDQENMEIDE SKEGESWIQG LTEGEYHDLS  960
VEERLNALVV LTSIANEGNS IRLVLEDRLE AANAVKKQML AEAQIDKSRL KEEIINKSDF  1020
PIHMVSKVET ELNGSTMEGG QSPLPVAXNK NNETIPSTAE NLGSVPNERA TLVADLFPGP  1080
DNCLSHQYGH ASKRSRSQLK SYIAHRAEEM YTYRSLPLGR DRRRNRYWQF VASSSSNDPG  1140
SGRIFVEMYD GKWRLIDSEE DFDALSMALD TRGVRESHLR IMLQMIETSF KENVRRNLQC  1200
ANFLVQSGTT PKNENDESSS SPDCNTVFNS PSSTVCGLNL DTMVTSSSFR IELGRNENEK  1260
KAAFRRYQDL QRWMLRESFN TATLCAMKFG EKRCTQLLDI CDFCLCLFDS EHSHCTSCHQ  1320
TFDTSGNDIN FFEHKLHCER ERKSYHWDTH TLDASLPLKS RLVKAVLAVI EAHVPSEAFL  1380
SFWTERRKNW GVRMDMSSSI EELLQILTLF ESVIKRDFLK SDFTTTDEHL SSCSVSGNVI  1440
HDQSDVGSVL TLPWIPRTSA ALALRLFEVD ASXYYIGCEK PEPDQYKETG EYMNFPSRYV  1500
QVKNDERNKL NELDYDDLMK KENSADPKSS RNSYKRGRGS RDHGRRRRWQ KKVNGSKSGR  1560
VRQHVKSNEK MNQGPRQLGQ GTQVMGVRGR RTVRKRRAEK SIQDEGLLGI VPSSTQNRDE  1620
SPKDFIGEWE DEKIDGFVDM EDEENVLEDE ENVLEDEENE ENEENVNNVE PMDSDDDAHA  1680
VGYERGSWDF GFDGTSNRWN GDLGIASDED VDLSEDYNGT EEAGNDDLEL DVDTSEESDC  1740
SPNRIGNNGG GESPVSDDYS D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein