PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141708.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 646aa MW: 74531.2 Da PI: 7.7853

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.1	3.5e-24	61	145	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YAke+GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++ +++ ++++w++ ++eleHnH+++ XP_022141708.1 61 DFYNVYAKELGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSQAN-----NPRPETRTGCPAMIIIRLVDTKRWRIVEVELEHNHPVS 145 6*******************999*************99888.....9********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MEEVCLNSEP IFDECDEYEV DGDGDDSLVG NDNESGEAQS KKNSPLPTVG LEFDSFDEAY 60 DFYNVYAKEL GFGIRVSNSW FRSKRKERYR AKLSCSSAGF KKKSQANNPR PETRTGCPAM 120 IIIRLVDTKR WRIVEVELEH NHPVSPQITR FYKSHKKMIL AAKKVQAQQH PVTEVHTIKL 180 YRTASLNGCN GCSNVDQREG ISSVDHLKHL ELRDGDGHAL YNYFCRMKLT NPNFFYLMDL 240 DNDGRLRNVF WADARSRAAY CYFCDTVIID TTCLNNRYEI PLISFVGVNH HGQSVLLGCG 300 FVGFEAVECF VWILKAWLRC MLGCSPQVII TDQNKKLLAA VSEVFPKACH CYSMWYIMQR 360 VPEKLGGLKG YEMIRSQLNK TIFGSLKIAE FETSWTNMIK HNGLGENKWL QSLYEDRKLW 420 APVYLKDIFF AGMVPIHANE SFKAFFDGYV HKHTSFKEFV DKYDLALHRK YHKESVADLE 480 SRNLSLELKT RCNFELQLSK VYTKEIFSKF QSEVEGMYSC FNTRQVNVNG PIVTYIVKER 540 IEVEGHEKEV KYFEVLYETT EVDIRCICSL FNYKGYLCRH ALNVLNYNGV EEIPARYILP 600 RWCKDFKRRY HPGGNNKQGV QPASGQGAEL CLHVVKLLPM DDRGAL

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MEEVCLNSEP IFDECDEYEV DGDGDDSLVG NDNESGEAQS KKNSPLPTVG LEFDSFDEAY  60
DFYNVYAKEL GFGIRVSNSW FRSKRKERYR AKLSCSSAGF KKKSQANNPR PETRTGCPAM  120
IIIRLVDTKR WRIVEVELEH NHPVSPQITR FYKSHKKMIL AAKKVQAQQH PVTEVHTIKL  180
YRTASLNGCN GCSNVDQREG ISSVDHLKHL ELRDGDGHAL YNYFCRMKLT NPNFFYLMDL  240
DNDGRLRNVF WADARSRAAY CYFCDTVIID TTCLNNRYEI PLISFVGVNH HGQSVLLGCG  300
FVGFEAVECF VWILKAWLRC MLGCSPQVII TDQNKKLLAA VSEVFPKACH CYSMWYIMQR  360
VPEKLGGLKG YEMIRSQLNK TIFGSLKIAE FETSWTNMIK HNGLGENKWL QSLYEDRKLW  420
APVYLKDIFF AGMVPIHANE SFKAFFDGYV HKHTSFKEFV DKYDLALHRK YHKESVADLE  480
SRNLSLELKT RCNFELQLSK VYTKEIFSKF QSEVEGMYSC FNTRQVNVNG PIVTYIVKER  540
IEVEGHEKEV KYFEVLYETT EVDIRCICSL FNYKGYLCRH ALNVLNYNGV EEIPARYILP  600
RWCKDFKRRY HPGGNNKQGV QPASGQGAEL CLHVVKLLPM DDRGAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein