PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141624.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 747aa MW: 83640.8 Da PI: 4.4251

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5e-09	584	626	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++++ el++ av+q+G++ + I + ++ gRt+ q+k+++ XP_022141624.1 584 RTKWSKQDTELFYGAVRQFGTD-FCMIQQLFP-GRTRRQIKLKFK 626 789*****************.*****.*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 747 aa Download sequence
MDPFDEILSD PGVTARTGGR FQPKIKPRPK KQTVAPQLST LSQDKKETIS DSISCHDGSG 60 DTKSIKSSSQ LPVIEENKES EDDLLLATTI SDFNDCSRPI SVESAERVDS MQFDLDSCVS 120 ILPSDSTTDG PAGSENLTDD TKNLGVLNCS HPSVSTADEA AVLDQSGLEL TQTEDGHFSD 180 GKIAGENIDM FYGLECLDDF HNQPKNEAGL QQATFSSEDG DLEKQRFQEC GADIAKDGLN 240 SEATTPSGHC KYRPKPRMRT TKEDTYTQIS QPEISNMLPP SPQVTSCDNR CINEASIATH 300 SDGILNDSSI NFDGYTSVNQ DTEAPVNVES LEYDSYGDIL VEDFNSDDQD EMSRGVSGKS 360 GNEKPSVEPN ISQQQESFPQ VVEENEHKKT SRKLRKQVSH HLDDPEDGVD ENQNFPNEPS 420 NGDGCNKNET SISRGKKASK KSSKTSSENE KPTRKRKEAN KAVPDVQAEK RPKKFSHSTR 480 RNRRQVNKVL LETPEDEIDF QKISFRDLII YHEYKEKLEK KEASTRRPAT NQRTDTVREE 540 FYNDEEESIA SEQGRGSDDD ETPDVVDMTS AYFNYQSFMD KTPRTKWSKQ DTELFYGAVR 600 QFGTDFCMIQ QLFPGRTRRQ IKLKFKSEER HHPLRLSDAI TNRANDHSHF LSVIGQLKEA 660 ANKAKQEANQ DELTENTGDE ELPELSPETN EEEVAKPGEG EGEGEGEGEA QNTEKEERVG 720 EIHSPLKSDA ASDDDDPHRW DEYKFDF

Sequence ? help Back to Top

Protein Sequence Length: 747 aa Download sequence

MDPFDEILSD PGVTARTGGR FQPKIKPRPK KQTVAPQLST LSQDKKETIS DSISCHDGSG  60
DTKSIKSSSQ LPVIEENKES EDDLLLATTI SDFNDCSRPI SVESAERVDS MQFDLDSCVS  120
ILPSDSTTDG PAGSENLTDD TKNLGVLNCS HPSVSTADEA AVLDQSGLEL TQTEDGHFSD  180
GKIAGENIDM FYGLECLDDF HNQPKNEAGL QQATFSSEDG DLEKQRFQEC GADIAKDGLN  240
SEATTPSGHC KYRPKPRMRT TKEDTYTQIS QPEISNMLPP SPQVTSCDNR CINEASIATH  300
SDGILNDSSI NFDGYTSVNQ DTEAPVNVES LEYDSYGDIL VEDFNSDDQD EMSRGVSGKS  360
GNEKPSVEPN ISQQQESFPQ VVEENEHKKT SRKLRKQVSH HLDDPEDGVD ENQNFPNEPS  420
NGDGCNKNET SISRGKKASK KSSKTSSENE KPTRKRKEAN KAVPDVQAEK RPKKFSHSTR  480
RNRRQVNKVL LETPEDEIDF QKISFRDLII YHEYKEKLEK KEASTRRPAT NQRTDTVREE  540
FYNDEEESIA SEQGRGSDDD ETPDVVDMTS AYFNYQSFMD KTPRTKWSKQ DTELFYGAVR  600
QFGTDFCMIQ QLFPGRTRRQ IKLKFKSEER HHPLRLSDAI TNRANDHSHF LSVIGQLKEA  660
ANKAKQEANQ DELTENTGDE ELPELSPETN EEEVAKPGEG EGEGEGEGEA QNTEKEERVG  720
EIHSPLKSDA ASDDDDPHRW DEYKFDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	5e-36	MYB_related family protein