PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141623.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 749aa MW: 83850 Da PI: 4.406

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5e-09	586	628	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++++ el++ av+q+G++ + I + ++ gRt+ q+k+++ XP_022141623.1 586 RTKWSKQDTELFYGAVRQFGTD-FCMIQQLFP-GRTRRQIKLKFK 628 789*****************.*****.*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MDPFDEILSD PGVTARTGGR FQPKIKPRPK KQTVAPQLST LSQDKKETIS DSISCHDGSG 60 DTKSIKSSSQ LPVIEENKES EDDLLLATTI SDFNDCSRPI SVESAERVDS MQFDLDSCVS 120 ILPSDSTTDG PAGSENLTDD TKNLGVLNCS HPSVSTADEA AVLDQSGLEL TQTEDGHFSD 180 GKIAGENIDM FYGLECLDDF HNQPKNEAGL QQATFSSEDG DLEKQRLEIE ECGADIAKDG 240 LNSEATTPSG HCKYRPKPRM RTTKEDTYTQ ISQPEISNML PPSPQVTSCD NRCINEASIA 300 THSDGILNDS SINFDGYTSV NQDTEAPVNV ESLEYDSYGD ILVEDFNSDD QDEMSRGVSG 360 KSGNEKPSVE PNISQQQESF PQVVEENEHK KTSRKLRKQV SHHLDDPEDG VDENQNFPNE 420 PSNGDGCNKN ETSISRGKKA SKKSSKTSSE NEKPTRKRKE ANKAVPDVQA EKRPKKFSHS 480 TRRNRRQVNK VLLETPEDEI DFQKISFRDL IIYHEYKEKL EKKEASTRRP ATNQRTDTVR 540 EEFYNDEEES IASEQGRGSD DDETPDVVDM TSAYFNYQSF MDKTPRTKWS KQDTELFYGA 600 VRQFGTDFCM IQQLFPGRTR RQIKLKFKSE ERHHPLRLSD AITNRANDHS HFLSVIGQLK 660 EAANKAKQEA NQDELTENTG DEELPELSPE TNEEEVAKPG EGEGEGEGEG EAQNTEKEER 720 VGEIHSPLKS DAASDDDDPH RWDEYKFDF

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MDPFDEILSD PGVTARTGGR FQPKIKPRPK KQTVAPQLST LSQDKKETIS DSISCHDGSG  60
DTKSIKSSSQ LPVIEENKES EDDLLLATTI SDFNDCSRPI SVESAERVDS MQFDLDSCVS  120
ILPSDSTTDG PAGSENLTDD TKNLGVLNCS HPSVSTADEA AVLDQSGLEL TQTEDGHFSD  180
GKIAGENIDM FYGLECLDDF HNQPKNEAGL QQATFSSEDG DLEKQRLEIE ECGADIAKDG  240
LNSEATTPSG HCKYRPKPRM RTTKEDTYTQ ISQPEISNML PPSPQVTSCD NRCINEASIA  300
THSDGILNDS SINFDGYTSV NQDTEAPVNV ESLEYDSYGD ILVEDFNSDD QDEMSRGVSG  360
KSGNEKPSVE PNISQQQESF PQVVEENEHK KTSRKLRKQV SHHLDDPEDG VDENQNFPNE  420
PSNGDGCNKN ETSISRGKKA SKKSSKTSSE NEKPTRKRKE ANKAVPDVQA EKRPKKFSHS  480
TRRNRRQVNK VLLETPEDEI DFQKISFRDL IIYHEYKEKL EKKEASTRRP ATNQRTDTVR  540
EEFYNDEEES IASEQGRGSD DDETPDVVDM TSAYFNYQSF MDKTPRTKWS KQDTELFYGA  600
VRQFGTDFCM IQQLFPGRTR RQIKLKFKSE ERHHPLRLSD AITNRANDHS HFLSVIGQLK  660
EAANKAKQEA NQDELTENTG DEELPELSPE TNEEEVAKPG EGEGEGEGEG EAQNTEKEER  720
VGEIHSPLKS DAASDDDDPH RWDEYKFDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	6e-36	MYB_related family protein