PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141619.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 752aa MW: 84133.3 Da PI: 4.3955

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5e-09	589	631	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++++ el++ av+q+G++ + I + ++ gRt+ q+k+++ XP_022141619.1 589 RTKWSKQDTELFYGAVRQFGTD-FCMIQQLFP-GRTRRQIKLKFK 631 789*****************.*****.*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MDPFDEILSD PGVTARTGGR FQPKIKPRPK KQTVAPQLST LSQDKKETIS DSISCHDGSG 60 DTKSIKSSSQ LPVIEENKES EDDLLLATTI SDFNDCSRPI SVESAERVDS MQFDLDSCVS 120 ILPSDSTTDG PAGSENLTDD TKNLGVLNCS HPSVSTADEA AVLDQSGLEL TQTEDGHFSD 180 GKIAGENIDM FYGLECLDDF HNQPKNEADP AGLQQATFSS EDGDLEKQRL EIEECGADIA 240 KDGLNSEATT PSGHCKYRPK PRMRTTKEDT YTQISQPEIS NMLPPSPQVT SCDNRCINEA 300 SIATHSDGIL NDSSINFDGY TSVNQDTEAP VNVESLEYDS YGDILVEDFN SDDQDEMSRG 360 VSGKSGNEKP SVEPNISQQQ ESFPQVVEEN EHKKTSRKLR KQVSHHLDDP EDGVDENQNF 420 PNEPSNGDGC NKNETSISRG KKASKKSSKT SSENEKPTRK RKEANKAVPD VQAEKRPKKF 480 SHSTRRNRRQ VNKVLLETPE DEIDFQKISF RDLIIYHEYK EKLEKKEAST RRPATNQRTD 540 TVREEFYNDE EESIASEQGR GSDDDETPDV VDMTSAYFNY QSFMDKTPRT KWSKQDTELF 600 YGAVRQFGTD FCMIQQLFPG RTRRQIKLKF KSEERHHPLR LSDAITNRAN DHSHFLSVIG 660 QLKEAANKAK QEANQDELTE NTGDEELPEL SPETNEEEVA KPGEGEGEGE GEGEAQNTEK 720 EERVGEIHSP LKSDAASDDD DPHRWDEYKF DF

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MDPFDEILSD PGVTARTGGR FQPKIKPRPK KQTVAPQLST LSQDKKETIS DSISCHDGSG  60
DTKSIKSSSQ LPVIEENKES EDDLLLATTI SDFNDCSRPI SVESAERVDS MQFDLDSCVS  120
ILPSDSTTDG PAGSENLTDD TKNLGVLNCS HPSVSTADEA AVLDQSGLEL TQTEDGHFSD  180
GKIAGENIDM FYGLECLDDF HNQPKNEADP AGLQQATFSS EDGDLEKQRL EIEECGADIA  240
KDGLNSEATT PSGHCKYRPK PRMRTTKEDT YTQISQPEIS NMLPPSPQVT SCDNRCINEA  300
SIATHSDGIL NDSSINFDGY TSVNQDTEAP VNVESLEYDS YGDILVEDFN SDDQDEMSRG  360
VSGKSGNEKP SVEPNISQQQ ESFPQVVEEN EHKKTSRKLR KQVSHHLDDP EDGVDENQNF  420
PNEPSNGDGC NKNETSISRG KKASKKSSKT SSENEKPTRK RKEANKAVPD VQAEKRPKKF  480
SHSTRRNRRQ VNKVLLETPE DEIDFQKISF RDLIIYHEYK EKLEKKEAST RRPATNQRTD  540
TVREEFYNDE EESIASEQGR GSDDDETPDV VDMTSAYFNY QSFMDKTPRT KWSKQDTELF  600
YGAVRQFGTD FCMIQQLFPG RTRRQIKLKF KSEERHHPLR LSDAITNRAN DHSHFLSVIG  660
QLKEAANKAK QEANQDELTE NTGDEELPEL SPETNEEEVA KPGEGEGEGE GEGEAQNTEK  720
EERVGEIHSP LKSDAASDDD DPHRWDEYKF DF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	5e-36	MYB_related family protein