PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141510.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 427aa MW: 46872.7 Da PI: 9.5398

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	199	221	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F ++L+ H+++ H XP_022141510.1 199 PCPECGEIFMKAETLELHQSVrH 221 7******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MASAMAKAAK TQRKLTRQTQ ENQKPKQQKA ERPPSWAVVR GIFSCKYLQP QQQPEKQQQH 60 QLPRKEKQQE QATEESTKNC KKMRCSGSLC SNTKVTHRLE AAPSPEVHKK RALTSVGSRN 120 NDSSSSCRST KAPPLNEQNG VLSATCSSLS ASSSSNSSNG ASFRGMPFRR FYGCYECKMV 180 IDPVLGMTRD PSLRATICPC PECGEIFMKA ETLELHQSVR HAVSELGPED TSKNIVEIIF 240 QSSWLKKQTP ICKIERILKV QNTPKTISKF EEYRDSIKAK ATKLPKKHPR CIADGNELLR 300 FHCTTLACSL GLNGSSNLCN SIPQCNVCSI IKNGFKVAGE AAEKGILTTA TSGKAHDSAG 360 ISSDSNDKRA MLVCRVIAGR VKKSLEGSME DYDSLAGAAG MYSNLDELYV FSPKAILPCF 420 VVIYGGF

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MASAMAKAAK TQRKLTRQTQ ENQKPKQQKA ERPPSWAVVR GIFSCKYLQP QQQPEKQQQH  60
QLPRKEKQQE QATEESTKNC KKMRCSGSLC SNTKVTHRLE AAPSPEVHKK RALTSVGSRN  120
NDSSSSCRST KAPPLNEQNG VLSATCSSLS ASSSSNSSNG ASFRGMPFRR FYGCYECKMV  180
IDPVLGMTRD PSLRATICPC PECGEIFMKA ETLELHQSVR HAVSELGPED TSKNIVEIIF  240
QSSWLKKQTP ICKIERILKV QNTPKTISKF EEYRDSIKAK ATKLPKKHPR CIADGNELLR  300
FHCTTLACSL GLNGSSNLCN SIPQCNVCSI IKNGFKVAGE AAEKGILTTA TSGKAHDSAG  360
ISSDSNDKRA MLVCRVIAGR VKKSLEGSME DYDSLAGAAG MYSNLDELYV FSPKAILPCF  420
VVIYGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-102	C2H2 family protein