PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141358.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 449aa MW: 50250 Da PI: 8.037

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5.2e-16	47	91	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW +eE++++++a k++G + W+ I +++g ++t+ q++s+ qk+ XP_022141358.1 47 RERWKEEEHQKFIEALKLYGRD-WRQIEEHVG-TKTAVQIRSHAQKF 91 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MNSAVYESTA SPDRHSSANI QLKEDNFSTV KEFSPKIRKP YTITKQRERW KEEEHQKFIE 60 ALKLYGRDWR QIEEHVGTKT AVQIRSHAQK FFSKVTRNSN GCSTNLVGCI EIPPPRPKRK 120 PAHPYPRKEV PQAHKAVPIL EQTRSLSPQF SDKECPSPTS TIAAASGSDT LVFANSRILH 180 DSASPDSSIP STEPNSSLLD NESPTPPAPG TSNSIPHERF SKNLELFPTD DVHDKDVSTK 240 EVSIQSLKLF GRTVLVTDPH KQTPTAEIRA SEADRKPREK YKQTSPWNSM VMESSMGNTE 300 GTWNHGAFYF IQLNSGNSNQ VAAGSAVPVS WWASYGGSPF SFVHYVKQAD ANLNPEVDDK 360 ETHKDESWCG SNTGSVNSRE NDIPFSNRDG DSVCKDELIG KALSCELISS HEKNTKGFVP 420 YKRCMRERGT KSNIITDAER EEKRIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MNSAVYESTA SPDRHSSANI QLKEDNFSTV KEFSPKIRKP YTITKQRERW KEEEHQKFIE  60
ALKLYGRDWR QIEEHVGTKT AVQIRSHAQK FFSKVTRNSN GCSTNLVGCI EIPPPRPKRK  120
PAHPYPRKEV PQAHKAVPIL EQTRSLSPQF SDKECPSPTS TIAAASGSDT LVFANSRILH  180
DSASPDSSIP STEPNSSLLD NESPTPPAPG TSNSIPHERF SKNLELFPTD DVHDKDVSTK  240
EVSIQSLKLF GRTVLVTDPH KQTPTAEIRA SEADRKPREK YKQTSPWNSM VMESSMGNTE  300
GTWNHGAFYF IQLNSGNSNQ VAAGSAVPVS WWASYGGSPF SFVHYVKQAD ANLNPEVDDK  360
ETHKDESWCG SNTGSVNSRE NDIPFSNRDG DSVCKDELIG KALSCELISS HEKNTKGFVP  420
YKRCMRERGT KSNIITDAER EEKRIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	9e-48	MYB_related family protein