PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141345.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family TCP
Protein Properties Length: 261aa    MW: 26936.3 Da    PI: 10.2132
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP120.61.8e-3734107274
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.e 74 
                     a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++  
  XP_022141345.1  34 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStI 107
                     78**************************************************************9999977641 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MSATESPNNG SIIDRHNHHQ QQPQQQAAVN GVLAVKKPPS KDRHSKVDGR GRRIRMPIIC  60
AARVFQLTRE LGHKSDGQTI EWLLRQAEPS IIAATGTGTT PASFSTISGS LRGVVGCSTS  120
LSSSSSLDHK PLLAPAPFIL GKRVRTDDDG GSKDDGGGGG GISVGPTVGS IMGPAAAGGY  180
WAIPARPDFG QVWSFAAAAA AAAPEMVLQP AAVSHQASLF VQQQSIGEAS AAKVGNYLPG  240
HLNLLASLSG PGSSGRRDEP R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.12e-60TCP family protein