PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141167.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 363aa MW: 39525.7 Da PI: 4.832

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.6	6.3e-15	97	148	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+l+P + kK + a+i +veYIk+Lq XP_022141167.1 97 QRMSHITVERNRRKQMNEHLSVLRSLMPCF---YVKKGDQASIIGGVVEYIKELQ 148 79*************************9...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MVDSLADFFQ QNEEFVDNPH LEGDDLFSIF ESLESVAEFT VIEDDIEAFK DGEETTSLVF 60 SETELETSPK SKRLKMTTTM SSPMAAPSEE PNPDGPQRMS HITVERNRRK QMNEHLSVLR 120 SLMPCFYVKK GDQASIIGGV VEYIKELQQV LQSLEAKKQR KVYSEVLSPR VVSSPRANLA 180 MSPRKPPLSP RLNLPISPRT PQPTSPYSKP PRLQQPPSTG TAAAAAAAGG GGYNMVSSAG 240 SCTTNVNNNN SLELPSPCNS SSTTTNSSID MNANDLVANS KSAIAEVEVK FTGPNVVLKT 300 VSPPIPGQAV KIISALEQLS LEILHVKITT LDETMLNSFT IKIGIECQLS AEELAHQIQQ 360 TFC

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MVDSLADFFQ QNEEFVDNPH LEGDDLFSIF ESLESVAEFT VIEDDIEAFK DGEETTSLVF  60
SETELETSPK SKRLKMTTTM SSPMAAPSEE PNPDGPQRMS HITVERNRRK QMNEHLSVLR  120
SLMPCFYVKK GDQASIIGGV VEYIKELQQV LQSLEAKKQR KVYSEVLSPR VVSSPRANLA  180
MSPRKPPLSP RLNLPISPRT PQPTSPYSKP PRLQQPPSTG TAAAAAAAGG GGYNMVSSAG  240
SCTTNVNNNN SLELPSPCNS SSTTTNSSID MNANDLVANS KSAIAEVEVK FTGPNVVLKT  300
VSPPIPGQAV KIISALEQLS LEILHVKITT LDETMLNSFT IKIGIECQLS AEELAHQIQQ  360
TFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	109	RMSHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53210.1	1e-61	bHLH family protein