PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141165.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 355aa MW: 38080.2 Da PI: 10.3938

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.1	4.9e-14	109	154	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++W++eE+ ++ + k+lG+g+W+ I++ + ++Rt+ q+ s+ qky XP_022141165.1 109 KPWSEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKY 154 58*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MVRESPRKCS HCGLNGHNSR TCSNFAKGNN YCVKLFGVNL MENNDESIRK SLSMGNLIHA 60 CNNGVDHNNA AAAGAGANNA GAGDDGGYLS DGLIHNKKRK AAHERKKGKP WSEEEHRTFL 120 AGLKKLGKGD WRGISKNFVT TRTPTQVASH AQKYFLRKMN ANDKKKRRAS LFDMPEITKN 180 NIVVPQDCNK ASSSMSSGES SQILLPKISS ENQQQVNNLP TQLINRFPHL CLDSPHFVPP 240 AAASGVANLH GIPYVVGVSP NVPIIPLVNI GGSVMTVGKS SSPNATLISH PSGIPPSPRS 300 SPHRTTTATK LELQLQLQPS GFEASDALEL KIGLPQSPQP KNLSSHTSGG AIRVI

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MVRESPRKCS HCGLNGHNSR TCSNFAKGNN YCVKLFGVNL MENNDESIRK SLSMGNLIHA  60
CNNGVDHNNA AAAGAGANNA GAGDDGGYLS DGLIHNKKRK AAHERKKGKP WSEEEHRTFL  120
AGLKKLGKGD WRGISKNFVT TRTPTQVASH AQKYFLRKMN ANDKKKRRAS LFDMPEITKN  180
NIVVPQDCNK ASSSMSSGES SQILLPKISS ENQQQVNNLP TQLINRFPHL CLDSPHFVPP  240
AAASGVANLH GIPYVVGVSP NVPIIPLVNI GGSVMTVGKS SSPNATLISH PSGIPPSPRS  300
SPHRTTTATK LELQLQLQPS GFEASDALEL KIGLPQSPQP KNLSSHTSGG AIRVI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	168	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61620.1	3e-57	MYB_related family protein