PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141124.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARR-B

Protein Properties

Length: 497aa MW: 56490.3 Da PI: 7.4314

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.3	9.5e-25	189	242	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+++ Wt+ LH+rF++a++ + G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ XP_022141124.1 189 KAKVIWTNSLHNRFLQAIRLI-GLDKAVPKKILEFMNVPGLTRENVASHLQKYRI 242 67999***********999.******************************6 PP
2	Myb_DNA-binding	31.9	3e-10	194	241	4	48
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a+++ G + +k+I + m+ g+t++++ s++qky+ XP_022141124.1 194 WTNSLHNRFLQAIRLIGLDkaVPKKILEFMNvPGLTRENVASHLQKYR 241 ***********************************************7 PP
3	Response_reg	66.9	9.2e-23	13	119	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l+vdD+ + + ++ +l+ +y ev +++++ eal++l++++ +Dl+++D+ mp+++Gl+l k+ +e klp+i+++a ++++ +l+ l+ G XP_022141124.1 13 ILLVDDDATSLAVVSAMLRLCRY-EVVTMRNPIEALHTLRARKgfFDLVVTDLHMPQINGLQLQKQVMQEF-KLPVIMMSADEKPSVILKSLEEG 105 89*******************.***********999999******************9988.9****************** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 + + +Kp++ +++ XP_022141124.1 106 VAFYMVKPISLDDV 119 *******99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MEEGRVMDVD VHILLVDDDA TSLAVVSAML RLCRYEVVTM RNPIEALHTL RARKGFFDLV 60 VTDLHMPQIN GLQLQKQVMQ EFKLPVIMMS ADEKPSVILK SLEEGVAFYM VKPISLDDVK 120 HVWQYAITAK EVTPNEAKTV AGRGLSIEKS SLEETSSIVP CPKEKKGAKS KNKKAKENRV 180 TKKSIAIKKA KVIWTNSLHN RFLQAIRLIG LDKAVPKKIL EFMNVPGLTR ENVASHLQKY 240 RIFLKRVAEK GADRSMKEHN SDYRLLRSSF ASAHFQPQLY RPKFQEIYQM NHSPILEANN 300 LRLPYLGNQH YSSDLSTNNE KHNFFFNGLV SSLTKIDQNF VSLGNEKPKF SSNETRMSSS 360 QSEIFRNIHD VNHNSGGSRS FSGNFEGTNQ LLEMICNNTN VKENENGCVL VASEEEVNVS 420 GWKFAANETI SFGDFGVDLQ DCFDVLSEIF MDKNGDQPSL REQEMRNMDL SDIWNEFEMD 480 NNTSPKKDLL STRTHEA

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MEEGRVMDVD VHILLVDDDA TSLAVVSAML RLCRYEVVTM RNPIEALHTL RARKGFFDLV  60
VTDLHMPQIN GLQLQKQVMQ EFKLPVIMMS ADEKPSVILK SLEEGVAFYM VKPISLDDVK  120
HVWQYAITAK EVTPNEAKTV AGRGLSIEKS SLEETSSIVP CPKEKKGAKS KNKKAKENRV  180
TKKSIAIKKA KVIWTNSLHN RFLQAIRLIG LDKAVPKKIL EFMNVPGLTR ENVASHLQKY  240
RIFLKRVAEK GADRSMKEHN SDYRLLRSSF ASAHFQPQLY RPKFQEIYQM NHSPILEANN  300
LRLPYLGNQH YSSDLSTNNE KHNFFFNGLV SSLTKIDQNF VSLGNEKPKF SSNETRMSSS  360
QSEIFRNIHD VNHNSGGSRS FSGNFEGTNQ LLEMICNNTN VKENENGCVL VASEEEVNVS  420
GWKFAANETI SFGDFGVDLQ DCFDVLSEIF MDKNGDQPSL REQEMRNMDL SDIWNEFEMD  480
NNTSPKKDLL STRTHEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01760.1	1e-48	ARR-B family protein