PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141094.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 193aa    MW: 22669.5 Da    PI: 8.9343
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.59.4e-086080526
                    --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                     C+ f+  G C++Gd C +aHg
  XP_022141094.1 60 ACPAFRN-GNCPRGDFCEYAHG 80
                    6777777.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEQVEDAAAV FGSDEFRMFA YKIQRCPRTR SHDWTECPYA HRGEKAQRRD LRRFNYSAVA  60
CPAFRNGNCP RGDFCEYAHG VFEYWLHPAR YRTRACNAGR FCQRKVCFFA HTPEQLRSET  120
KQKFHFNAHR TRVPVVAVEA PLESKNDDVS NIVNGLKGLT VREIRERKND RNFGWEVSDS  180
DLPHIGWIRE LLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.13e-71C3H family protein