PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140978.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 268aa    MW: 30244.3 Da    PI: 9.3267
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-113074147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+  ++++++a++++  + Wk+I + +g  +t  q++s+ qky
   XP_022140978.1 30 RESWTEPQHDKFLEAIQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MALPFDTATT SSREDLWKRA RKPYTITKCR ESWTEPQHDK FLEAIQLFDR DWKKIEAFVG  60
SKTVIQIRSH AQKYFLKVEK SGTGEHLPPP RPKRKAAHPY PQKASKNALA LVSGSFQSSS  120
VEPKYILKPD SSSVPASFIS AAAMSSRADN SIQTVNFSQG ARGQITDNNC CSSTERIPRA  180
SFPTKSIIEE QNNHQLRVLP DFGQVYNFIG SVFDPEATDH LQRLKKMDPI DVETVLLLMR  240
NLSINLASPD FEDHKKVLSS YDVFMEHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-102MYB_related family protein