PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022140679.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | TCP | ||||||||
Protein Properties | Length: 181aa MW: 19840.2 Da PI: 7.4546 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 102.9 | 5.3e-32 | 40 | 121 | 8 | 83 |
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssas 83 +++h+kv gRdRR+Rl+ +caar+F+L++eLG ++d++t+eWLl++a+p+i+++tg + +++ss+ sa XP_022140679.1 40 PKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKdiasaalnlaacnP-------SPSSSNLSAT 121 69********************************************************54444444444321.......2222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MGSKNMRVKK ATSSSPRNAP KSNSNSPNAS ESKPLPSKAP KDRHAKVHGR DRRIRLPPLC 60 AARVFQLTRE LGNKTDGQTV EWLLKKAEPS IIAITGKDIA SAALNLAACN PSPSSSNLSA 120 TTSCFQQETN NYTFPMPNIP LPNYEFDLVS DFDMELFAHH ITTLQEVAEN LEQDDGQDSD 180 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 8e-28 | TCP family protein |