PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140646.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CO-like

Protein Properties

Length: 429aa MW: 46837.4 Da PI: 5.4457

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.1	2.3e-05	2	35	3	36
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg 36 e+ C+ ++ ++ +C++++ lC C + H+ XP_022140646.1 2 EPLCEFCGVVRAVVYCKSDSARLCLHCDGSVHSA 35 689****99***************999954 PP
2	CCT	62.7	1.1e-21	373	416	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ XP_022140646.1 373 RDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAG 416 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MEPLCEFCGV VRAVVYCKSD SARLCLHCDG SVHSANSLSR RHLRSLLCDK CNAQPAIVRC 60 MDDKLSLCHG CDWNGNACSS VGHRRPVLHC YTGCPSMPEF SRIWSSVLEA PSCSTGFDAA 120 ADWASLPTPS INDNSISLTD VEAAGLGAPK LNDLDSCSKF EPWIAPASAF PPNPSYQLPF 180 SRPQPSFLSD DSDLPKSCTD FKDIATHDNN DICEGLNIGN VPLNLEGGEE LFACPQGTVK 240 CQFQDGELEY LLMDKNLSGT ESNGPVENAI EESSPGQQDY MGFHSSQVGL SMNTIQNGNS 300 NCMLMNPSCN GNLNIGFPTG QVHSSISLSL SNITGESSAA DYQDCGLSPA FLTETSWDPS 360 MEVIGPQAKD RNRDKAKMRY NEKKKTRTFG KQIRYASRKA RADTRKRVKG RFVKAGEAYD 420 YDPLVTRNF

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MEPLCEFCGV VRAVVYCKSD SARLCLHCDG SVHSANSLSR RHLRSLLCDK CNAQPAIVRC  60
MDDKLSLCHG CDWNGNACSS VGHRRPVLHC YTGCPSMPEF SRIWSSVLEA PSCSTGFDAA  120
ADWASLPTPS INDNSISLTD VEAAGLGAPK LNDLDSCSKF EPWIAPASAF PPNPSYQLPF  180
SRPQPSFLSD DSDLPKSCTD FKDIATHDNN DICEGLNIGN VPLNLEGGEE LFACPQGTVK  240
CQFQDGELEY LLMDKNLSGT ESNGPVENAI EESSPGQQDY MGFHSSQVGL SMNTIQNGNS  300
NCMLMNPSCN GNLNIGFPTG QVHSSISLSL SNITGESSAA DYQDCGLSPA FLTETSWDPS  360
MEVIGPQAKD RNRDKAKMRY NEKKKTRTFG KQIRYASRKA RADTRKRVKG RFVKAGEAYD  420
YDPLVTRNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	2e-90	CO-like family protein