PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140604.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 296aa MW: 32116.9 Da PI: 4.4479

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.6e-05	270	293	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+ksF + L++H + H XP_022140604.1 270 FSCKSCDKSFGSDGALQSHSKAkH 293 89*****************88777 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MEFWGVEVKP GQALAVKPGD QKYLHLSQAT LGEIKKDKAN ESVTIFLKIG DQKLVLGVLS 60 AEKFPQLSFD LVFEKEFELS HNGKSGSIYC LGYQASAEDQ EHEEYLDSDF GSEDEELALH 120 PAQNGKPSQK EKAIVEKLNA MKPESSKKAD VKPLDPSKED EDDDSEDDDE SDEDDDSDDE 180 SDEEMLGADS DSDDEDDGTE SDEETPKKVE SNKKRSNDSA SKTPLSKKAK LASAEKTDAK 240 KGGHTATPHP AKKPAKTAGK TETPKSGGQF SCKSCDKSFG SDGALQSHSK AKHAGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03740.1	1e-29	C2H2 family protein