PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140335.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 286aa    MW: 32237.1 Da    PI: 5.4142
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-102122521055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_022140335.1 212 RKRRERINERLRILQKLVPNG-----TKVDISTMLEEAVHYVKFLQ 252
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDCFGEWDFC SSILSLEELD FAPFNNSPPA GADAWFCSLD YANNFVDQIP CCIAADDHSI  60
ASGGIAMEEM KNMESILVQE MTGFCGHDEH SILPNQLLHQ KRKSNLPADD DHNNLHVPKK  120
KIRTSNNVQK TRKPNVKTMQ KLGSRGRKCE EEEENGVSDH MNSYSSENSS EDENASQELT  180
NGGHDRAEAE PPKAKTRASR GSATDPQSLY ARKRRERINE RLRILQKLVP NGTKVDISTM  240
LEEAVHYVKF LQLQIKLLSS DELWMYAPIA YNGMDIGLQQ RLSSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.13e-41bHLH family protein