PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140115.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 517aa    MW: 58128.6 Da    PI: 6.7179
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140115.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.91.9e-1960115156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r++ +++t+ q++e+e++F+++++p+ ++r+ L+++lgL+  qVk+WFqN+R+++k
  XP_022140115.1  60 RKRYHRHTQLQIQEMEAFFKECPHPDDKQRKNLSRELGLEPLQVKFWFQNKRTQMK 115
                     789999***********************************************998 PP
2START189.22.1e-592454661206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela +a++e++++a+a+e +Wv  +    e++n+d +l++ +++         ++ea+r+s +v  ++ +lv +l+d++ qW+  +     ka t
  XP_022140115.1 245 ELAVSAMEEVYTMAQAGETLWVPAPnnstEILNQDQYLTTYSTGIIgprilgLTSEASRESSIVAFNHLKLVDILMDVN-QWSSIFCgivsKALT 338
                     57899************************************99888*********************************.******99999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     lev+s+g      galq+m+ae+q++splvp R+ +fvRy++q+g+g+w++vdvS+d  ++ p      + +++pSg+li++++n  sk+twveh
  XP_022140115.1 339 LEVLSPGvggnynGALQVMSAEFQVPSPLVPtRENYFVRYCKQQGDGSWAVVDVSLDYLRPTPI----SKTRRRPSGCLIQQLPNDSSKITWVEH 429
                     **************************************************************95....44557********************** PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     v++++r++h+l+++lv sgla+gak+wvatl+rqc++
  XP_022140115.1 430 VEVDDRTVHNLYKRLVTSGLAFGAKRWVATLDRQCQR 466
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MFGGLDFEDQ QDLLLEMTQK NFESELENFG EDEFESRSVT DAMEAPSGED QSQHNHSNKR  60
KRYHRHTQLQ IQEMEAFFKE CPHPDDKQRK NLSRELGLEP LQVKFWFQNK RTQMKAQHER  120
HENAILKAQN EKLRAENMRY KEALSNTSCP NCGGPSALGE MSFDGQHLRL DNAHLREEIE  180
RLNTVAGKYG PGKPWGSRSH LQSHHVPSRT LDLGSVGRLK PQPPDFIGDM LKSVTTEIDK  240
PVIVELAVSA MEEVYTMAQA GETLWVPAPN NSTEILNQDQ YLTTYSTGII GPRILGLTSE  300
ASRESSIVAF NHLKLVDILM DVNQWSSIFC GIVSKALTLE VLSPGVGGNY NGALQVMSAE  360
FQVPSPLVPT RENYFVRYCK QQGDGSWAVV DVSLDYLRPT PISKTRRRPS GCLIQQLPND  420
SSKITWVEHV EVDDRTVHNL YKRLVTSGLA FGAKRWVATL DRQCQRLANS LATNIPALDI  480
CVVTGQEGRK SVMKLAERMV RSFCSGVGAS SAHNWTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein