PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139982.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 844aa    MW: 93014.2 Da    PI: 6.2132
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.32.6e-181876357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+++Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022139982.1 18 KYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 76
                    6789*****************************************************97 PP
2START171.46e-541663732205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++ +++l vis+g  g+++l 
  XP_022139982.1 166 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPT-KVAEILKDRLSWFRDCRCVDILSVISTGngGTIELL 259
                     68999*****************************************************.8999999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s +  p+    ss+vRae+lpSg+li+ +++g s +++v+hvdl++++++++lr+l+
  XP_022139982.1 260 YMQTYAPTTLAAaRDFWTLRYTTSLEDGSLVICERSLTSSTGGPSgppPSSFVRAEMLPSGYLIRACEGG-SLIHIVDHVDLDAWSVPEVLRPLY 353
                     ***************************************99999888899*******************9.************************ PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + +++++va+l++ ++
  XP_022139982.1 354 ESTKILAQRMTVAALRYVRQ 373
                     ***************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    
MALAIHRDSL NKQMDTSKYV RYTPEQVDAL ERVYAECPKP SSLRRQQLIR ECPILSNIEP  60
KQIKVWFQNR RCREKQRKEA SRLQTVNRKL TAMNKLLMEE NDRLQKQVSR LVYDNGYMKQ  120
QLHTASGTTT DNSCESVVMS GQHHQQQNPT KHTQKDANNP AGLLAIAEET LAEFLSKATG  180
TAVDWVQMIG MKPGPDSIGI VAVSRNCNGV AARACGLVSL EPTKVAEILK DRLSWFRDCR  240
CVDILSVIST GNGGTIELLY MQTYAPTTLA AARDFWTLRY TTSLEDGSLV ICERSLTSST  300
GGPSGPPPSS FVRAEMLPSG YLIRACEGGS LIHIVDHVDL DAWSVPEVLR PLYESTKILA  360
QRMTVAALRY VRQISQEASG EIQLGGGRQP AVLRTFSQRL CRGFNDAVNG FVDDGWSLMD  420
SDGVEDVTVV INSSPNKFLG LQYNTSLYPT FGGVLCAKAS MLLQNVPPAL LVRFLREHRS  480
EWADYGVDAY SATCLKASAY AVPCARPGGF SSGQVILPLA HTVENEEFLE VVRLEGHAMF  540
PEEAALAGRD MYLLQLCSGI DENAVGSCAQ LVFAPIDESF ADDAPLLPSG FRVIPLESKT  600
DAPAATRTLD LASTLEVRPG TARPGSETDV TNYNLRSVLT IAFQFTFENH MRDSVAAMAR  660
QYVRTVVGSV QRVAMAISPS QLGSQIGPKS LPGSPEALTL AQWICRSYRI HTGAELFQVE  720
SQSDDAILKQ LWHHSDTILC CSVKTNASPV FTFANQAGLD MLETTLVALQ DIMLDKILDD  780
AGRKILCSEF SKIMQQGFIY LPAGICVSSM GRPVSYEQAI AWKVLNDDDV HHCLAFMFVN  840
WSFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein