PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139850.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 256aa MW: 28200.1 Da PI: 9.6199

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.1	2.3e-11	68	113	3	53
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 r+h+e+ErrRR+riNs + +Lr l+P + K +Ka+ L ++v +k+ XP_022139850.1 68 RNHSEAERRRRQRINSHLTTLRGLVPCL-----VKRDKATLLAEVVSQVKE 113 58*************************9.....799999999998876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MAYSYDPTTS IDPFFHSLGS LDSGLVQRGG SILSQSLVLN CEKGEIVKAP IHPSKKRVSE 60 EKALAALRNH SEAERRRRQR INSHLTTLRG LVPCLVKRDK ATLLAEVVSQ VKEMKKKASE 120 ASNGVFVPMD TDEVKVEPCG IEVNGYMSFK ATLCCEYRPE LLSDLKQTLD SFHLKLLKAE 180 ISTLGARVKN AFFFTSSIAE NGDHSDASRH LASSVRQAIS FVLEKASSPE YSPRTTLSTK 240 RRRLSSFDTS SSSSGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	244	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	8e-39	bHLH family protein