PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139813.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 475aa MW: 52716.6 Da PI: 10.6359

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139813.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.4	5.8e-07	9	38	3	32
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg 32 rW t+E++ll av ++G+g+W+++a+++ XP_022139813.1 9 RWDTWEELLLGGAVLRHGTGDWNLVAAELR 38 9**************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MGTEAIERRW DTWEELLLGG AVLRHGTGDW NLVAAELRAR IVRPYACTPE VCKAKYEDLQ 60 KRFVGCKAWY EELRRKRIME LRQALEHSED SIGSLESKLE ALKSRSGDKC VVNSCSRSES 120 WGAVQKRTSN ELSAGSFTQE IRTCSSLECE AAPLSAEEIE IKAEAEALQD KVSSIEKLRG 180 ILYGSQGGTV RKRRGKRKRK NCNTNSNSNC NSNRDVKEGS IGENNLSESP NPATVSQSCC 240 NSFEPHGPSD ANEACRSSAM DGVGVDVLMA AFNSVAQSKS ASVFRRRLDS QKRGRYKKVI 300 RQHLDIEAIR SRVTSHYITT LKELYRDLLL LANNALVFYS RNSREHQSAV LLRGIITSKF 360 KKLFKNSSTV VPHNHHKQKT QIIDPVVKPR RSQPAKHNVS QKEGNLRDVK TQNGGRRRGN 420 IANPHSSVGL PKKETSLGAS TGKKGPGATR KAVVGTSKSE RSATGTRGRK RGRTK

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MGTEAIERRW DTWEELLLGG AVLRHGTGDW NLVAAELRAR IVRPYACTPE VCKAKYEDLQ  60
KRFVGCKAWY EELRRKRIME LRQALEHSED SIGSLESKLE ALKSRSGDKC VVNSCSRSES  120
WGAVQKRTSN ELSAGSFTQE IRTCSSLECE AAPLSAEEIE IKAEAEALQD KVSSIEKLRG  180
ILYGSQGGTV RKRRGKRKRK NCNTNSNSNC NSNRDVKEGS IGENNLSESP NPATVSQSCC  240
NSFEPHGPSD ANEACRSSAM DGVGVDVLMA AFNSVAQSKS ASVFRRRLDS QKRGRYKKVI  300
RQHLDIEAIR SRVTSHYITT LKELYRDLLL LANNALVFYS RNSREHQSAV LLRGIITSKF  360
KKLFKNSSTV VPHNHHKQKT QIIDPVVKPR RSQPAKHNVS QKEGNLRDVK TQNGGRRRGN  420
IANPHSSVGL PKKETSLGAS TGKKGPGATR KAVVGTSKSE RSATGTRGRK RGRTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	1e-17	MYB_related family protein